Multiple platform build/check report for BioC 3.7

a4Classif 1.28.0

Tobias Verbeke

a4Core 1.28.0

Tobias Verbeke

a4Preproc 1.28.0

Tobias Verbeke

a4Reporting 1.28.0

Tobias Verbeke , Willem Ligtenberg

ABAEnrichment 1.10.0

Steffi Grote

ABarray 1.48.0

Yongming Andrew Sun

ABSSeq 1.34.1

Wentao Yang

acde 1.10.0

Juan Pablo Acosta

aCGH 1.58.0

Peter Dimitrov

ACME 2.36.0

Sean Davis

ADaCGH2 2.20.0

Ramon Diaz-Uriarte

adaptest 1.0.0

Weixin Cai

adSplit 1.50.0

Claudio Lottaz

affxparser 1.52.0

Kasper Daniel Hansen

affy 1.58.0

Rafael A. Irizarry

affycomp 1.56.0

Rafael A. Irizarry

AffyCompatible 1.40.0

Martin Morgan

affyContam 1.38.0

V. Carey

affycoretools 1.52.2

James W. MacDonald

AffyExpress 1.46.0

Xuejun Arthur Li

affyILM 1.32.0

Myriam Kroll and Fabrice Berger

affyio 1.50.0

Ben Bolstad

affylmGUI 1.54.1

Gordon Smyth

affyPara 1.40.0

Markus Schmidberger

affypdnn 1.54.0

Laurent Gautier

affyPLM 1.56.0

Ben Bolstad

affyQCReport 1.58.0

Craig Parman

AffyRNADegradation 1.26.0

Mario Fasold

AGDEX 1.28.0

Cuilan lani Gao

agilp 3.12.0

Benny Chain

AgiMicroRna 2.30.0

Pedro Lopez-Romero

AIMS 1.12.0

Eric R Paquet

ALDEx2 1.12.0

Greg Gloor

AllelicImbalance 1.18.0

Jesper R Gadin

alpine 1.6.0

Michael Love

alsace 1.16.0

Ron Wehrens

altcdfenvs 2.42.0

Laurent Gautier

AMOUNTAIN 1.6.0

Dong Li

amplican 1.2.1

Eivind Valen

ampliQueso 1.18.0

Michal Okoniewski

AnalysisPageServer 1.14.0

Brad Friedman

anamiR 1.8.0

Ti-Tai Wang

Anaquin 2.4.0

Ted Wong

AneuFinder 1.8.0

Aaron Taudt

ANF 1.2.0

Tianle Ma

annaffy 1.52.0

Colin A. Smith

annmap

...NOT SUPPORTED...

annotate 1.58.0

Bioconductor Package Maintainer

AnnotationDbi 1.42.1

Bioconductor Package Maintainer

AnnotationFilter 1.4.0

Bioconductor Maintainer

AnnotationForge 1.22.2

Bioconductor Package Maintainer

skipped

AnnotationFuncs 1.30.0

Stefan McKinnon Edwards

AnnotationHub 2.12.1

Bioconductor Package Maintainer

AnnotationHubData 1.10.3

Bioconductor Package Maintainer

annotationTools 1.54.0

Alexandre Kuhn

annotatr 1.6.0

Raymond G. Cavalcante

anota 1.28.0

Ola Larsson

anota2seq 1.2.0

Christian Oertlin , Julie Lorent

antiProfiles 1.20.0

Hector Corrada Bravo

apComplex 2.46.0

Denise Scholtens

apeglm 1.2.1

Anqi Zhu

aroma.light 3.10.0

Henrik Bengtsson

ArrayExpress 1.40.0

Ugis Sarkans

ArrayExpressHTS

...NOT SUPPORTED...

arrayMvout 1.38.0

V. Carey

arrayQuality 1.58.0

Agnes Paquet

arrayQualityMetrics 3.36.0

Mike Smith

ArrayTools 1.40.0

Arthur Li

ArrayTV 1.18.0

Eitan Halper-Stromberg

ARRmNormalization 1.20.0

Jean-Philippe Fortin

ASAFE 1.6.0

Qian Zhang

ASEB 1.24.0

Likun Wang

ASGSCA 1.14.0

Hela Romdhani

ASICS 1.0.1

Gaëlle Lefort

ASpli 1.6.0

Estefania Mancini

ASSET 1.98.0

Samsiddhi Bhattacharjee

ASSIGN 1.16.0

Ying Shen , W. Evan Johnson

ATACseqQC 1.4.3

Jianhong Ou

attract 1.32.0

Samuel Zimmerman

AUCell 1.2.4

Sara Aibar

BaalChIP 1.6.0

Ines de Santiago

BAC 1.40.0

Raphael Gottardo

bacon 1.8.0

Maarten van Iterson

BADER 1.18.0

Andreas Neudecker

BadRegionFinder 1.8.0

Sarah Sandmann

BAGS 2.20.0

Alejandro Quiroz-Zarate

ballgown 2.12.0

Jack Fu

bamsignals 1.12.1

Alessandro Mammana

banocc 1.4.0

Emma Schwager

skipped

basecallQC 1.4.0

Thomas Carroll

BaseSpaceR 1.24.0

Jared O'Connell

Basic4Cseq 1.16.0

Carolin Walter

BASiCS 1.2.1

Catalina A. Vallejos , Nils Eling

BasicSTARRseq 1.8.0

Annika Buerger

BatchQC 1.8.1

Solaiappan Manimaran

BayesKnockdown 1.6.0

William Chad Young

BayesPeak 1.32.0

Jonathan Cairns

baySeq 2.14.0

Thomas J. Hardcastle

BBCAnalyzer 1.10.0

Sarah Sandmann

BCRANK 1.42.0

Adam Ameur

bcSeq 1.2.0

Jiaxing Lin

beachmat 1.2.1

Aaron Lun

beadarray 2.30.0

Mark Dunning

beadarraySNP 1.46.0

Jan Oosting

BeadDataPackR 1.32.0

Mike Smith

BEARscc 1.0.0

Benjamin Schuster-Boeckler

BEAT 1.18.0

Kemal Akman

BEclear 1.12.1

David Rasp

bgafun 1.42.0

Iain Wallace

BgeeDB 2.6.2

Julien Wollbrett , Julien Roux , Andrea Komljenovic , Frederic Bastian

BGmix

...NOT SUPPORTED...

bgx 1.46.0

Ernest Turro

BHC 1.32.0

Rich Savage

BicARE 1.38.0

Pierre Gestraud

BiFET

ERROR (Bad DESCRIPTION file)

BiGGR 1.16.0

Anand K. Gavai

bigmelon 1.6.0

Tyler J. Gorrie-Stone

bigmemoryExtras

...NOT SUPPORTED...

bioassayR 1.18.0

Tyler Backman

Biobase 2.40.0

Bioconductor Package Maintainer

biobroom 1.12.1

John D. Storey and Andrew J. Bass

bioCancer 1.8.0

Karim Mezhoud

BiocCaseStudies 1.42.0

Bioconductor Package Maintainer

BiocCheck 1.16.0

Bioconductor Package Maintainer

BiocFileCache 1.4.0

Lori Shepherd

BiocGenerics 0.26.0

Bioconductor Package Maintainer

biocGraph 1.42.0

Florian Hahne

BiocInstaller 1.30.0

Bioconductor Package Maintainer

BiocOncoTK 1.0.3

VJ Carey

skipped

BioCor 1.4.0

Lluís Revilla Sancho

BiocParallel 1.14.2

Bioconductor Package Maintainer

BiocSklearn 1.2.0

VJ Carey

BiocStyle 2.8.2

Bioconductor Package Maintainer

BiocVersion 3.7.4

Bioconductor Package Maintainer

biocViews 1.48.3

Bioconductor Package Maintainer

BiocWorkflowTools 1.6.2

Mike Smith

bioDist 1.52.0

Bioconductor Package Maintainer

biomaRt 2.36.1

Mike Smith

biomformat 1.8.0

Paul J. McMurdie

BioMVCClass 1.48.0

Elizabeth Whalen

biomvRCNS 1.20.0

Yang Du

BioNet 1.40.0

Marcus Dittrich

BioNetStat 1.0.4

Vinicius Jardim

BioQC 1.8.0

Jitao David Zhang

BioSeqClass 1.38.0

Li Hong

biosigner 1.8.0

Philippe Rinaudo , Etienne Thevenot

Biostrings 2.48.0

H. Pagès

biosvd 2.16.0

Anneleen Daemen , Matthew Brauer

biotmle 1.4.0

Nima Hejazi

biovizBase 1.28.2

Michael Lawrence

BiRewire 3.12.0

Andrea Gobbi

birta 1.24.0

Benedikt Zacher

birte 1.16.0

Holger Froehlich

BiSeq 1.20.0

Katja Hebestreit

BitSeq 1.24.0

Antti Honkela , Panagiotis Papastamoulis

blima 1.14.0

Vojtěch Kulvait

BLMA 1.4.0

Tin Nguyen

bnbc 1.2.0

Kipper Fletez-Brant

BPRMeth 1.6.0

Chantriolnt-Andreas Kapourani

BRAIN 1.26.0

Piotr Dittwald

BrainStars 1.24.0

Itoshi NIKAIDO

branchpointer 1.6.0

Beth Signal

bridge 1.44.0

Raphael Gottardo

BridgeDbR 1.14.0

Egon Willighagen

BrowserViz 2.2.0

Paul Shannon

BrowserVizDemo

...NOT SUPPORTED...

BSgenome 1.48.0

H. Pagès

bsseq 1.16.1

Kasper Daniel Hansen

BubbleTree 2.10.0

Todd Creasy , Wei Zhu

BufferedMatrix 1.44.0

Ben Bolstad

BufferedMatrixMethods 1.44.0

Ben Bolstad

BUMHMM 1.4.0

Alina Selega

bumphunter 1.22.0

Rafael A. Irizarry

BUS 1.36.0

Yuanhua Liu

CAFE 1.16.0

Sander Bollen

CAGEfightR 1.0.0

Malte Thodberg

CAGEr 1.22.3

Vanja Haberle , Charles Plessy

CALIB 1.46.0

Hui Zhao

CAMERA 1.36.0

Steffen Neumann

canceR 1.14.0

Karim Mezhoud

cancerclass 1.24.0

Daniel Kosztyla

CancerInSilico 2.0.0

Thomas D. Sherman

CancerMutationAnalysis 1.22.0

Simina M. Boca

CancerSubtypes 1.6.0

Taosheng Xu

CAnD 1.12.0

Caitlin McHugh

caOmicsV 1.10.0

Henry Zhang

Cardinal 1.12.1

Kylie A. Bemis

casper 2.14.0

David Rossell

CATALYST 1.4.2

Helena L. Crowell

Category 2.46.0

Bioconductor Package Maintainer

categoryCompare 1.24.0

Robert M. Flight

CausalR 1.12.0

Glyn Bradley , Steven Barrett

cbaf 1.2.0

Arman Shahrisa

ccfindR 1.0.0

Jun Woo

ccmap 1.6.0

Alex Pickering

CCPROMISE 1.6.0

Xueyuan Cao

ccrepe 1.16.0

Emma Schwager ,Craig Bielski, George Weingart

cellbaseR 1.4.0

Mohammed OE Abdallah

cellGrowth 1.24.0

Julien Gagneur

cellHTS2 2.44.0

Joseph Barry

cellity 1.8.0

Tomislav Ilicic

CellMapper 1.6.0

Brad Nelms

CellNOptR 1.26.0

A.Gabor

cellscape 1.4.0

Maia Smith

CellScore 1.0.0

Nancy Mah

cellTree 1.10.0

David duVerle

CEMiTool 1.4.2

Helder Nakaya

CexoR 1.18.0

Pedro Madrigal

CFAssay 1.14.0

Herbert Braselmann

CGEN 3.16.0

William Wheeler

CGHbase 1.40.0

Mark van de Wiel

CGHcall 2.42.0

Mark van de Wiel

cghMCR 1.38.0

J. Zhang

CGHnormaliter 1.34.0

Bart P.P. van Houte

CGHregions 1.38.0

Sjoerd Vosse

ChAMP 2.10.2

Yuan Tian

CHARGE 1.0.0

Benjamin Mayne

charm 2.26.0

Peter Murakami

ChemmineOB 1.18.0

Thomas Girke

ChemmineR 3.32.1

Thomas Girke

ChIC

...NOT SUPPORTED...

Chicago 1.8.0

Mikhail Spivakov

chimera 1.22.0

Raffaele A Calogero

chimeraviz 1.6.2

Stian Lågstad

ChIPanalyser 1.2.0

Patrick C.N. Martin

ChIPComp 1.10.0

Li Chen

chipenrich 2.4.0

Raymond G. Cavalcante

ChIPexoQual 1.4.0

Rene Welch

ChIPpeakAnno 3.14.2

Lihua Julie Zhu

ChIPQC 1.16.1

Tom Carroll , Rory Stark

ChIPseeker 1.16.1

Guangchuang Yu

chipseq 1.30.0

Bioconductor Package Maintainer

ChIPseqR 1.34.0

Peter Humburg

ChIPSeqSpike 1.0.0

Nicolas Descostes

ChIPsim 1.34.0

Peter Humburg

ChIPXpress

...NOT SUPPORTED...

chopsticks 1.46.0

Hin-Tak Leung

chroGPS 1.28.0

Oscar Reina

chromDraw 2.10.0

Jan Janecka

ChromHeatMap 1.34.0

Tim F. Rayner

chromPlot 1.8.0

Karen Y. Orostica

chromstaR 1.6.2

Aaron Taudt

chromswitch 1.2.1

Selin Jessa

chromVAR 1.2.0

Alicia Schep

CHRONOS 1.8.1

Panos Balomenos

CINdex 1.8.0

Yuriy Gusev

skipped

cisPath 1.20.0

Likun Wang

ClassifyR 2.0.10

Dario Strbenac

cleanUpdTSeq 1.18.0

Sarah Sheppard ; Jianhong Ou

cleaver 1.18.0

Sebastian Gibb

clippda 1.30.0

Stephen Nyangoma

clipper 1.20.1

Paolo Martini

Clomial 1.16.0

Habil Zare

Clonality 1.28.0

Irina Ostrovnaya

clonotypeR 1.18.0

Charles Plessy

clst 1.28.0

Noah Hoffman

clstutils 1.28.0

Noah Hoffman

clustComp 1.8.0

Aurora Torrente

clusterExperiment 2.0.2

Elizabeth Purdom

ClusterJudge 1.2.0

Adrian Pasculescu

clusterProfiler 3.8.1

Guangchuang Yu

clusterSeq 1.4.0

Thomas J. Hardcastle

ClusterSignificance 1.8.2

Jason T Serviss

clusterStab 1.52.0

James W. MacDonald

CMA 1.38.0

Christoph Bernau

cn.farms 1.28.0

Andreas Mitterecker

cn.mops 1.26.0

Guenter Klambauer

CNAnorm 1.26.0

Stefano Berri

CNEr 1.16.1

Ge Tan

CNORdt 1.22.0

A. MacNamara

CNORfeeder 1.20.0

F.Eduati

CNORfuzzy 1.22.0

T. Cokelaer

CNORode 1.22.0

David Henriques

CNPBayes 1.10.0

Jacob Carey

CNTools 1.36.0

J. Zhang

cnvGSA 1.24.0

Joseph Lugo

CNVPanelizer 1.12.0

Thomas Wolf

CNVrd2 1.18.0

Hoang Tan Nguyen

CNVtools 1.74.0

Chris Barnes

cobindR 1.18.0

Manuela Benary

CoCiteStats 1.52.0

Bioconductor Package Maintainer

codelink 1.48.0

Diego Diez

CODEX 1.12.0

Yuchao Jiang

coexnet 1.2.0

Juan David Henao

CoGAPS 3.0.2

Elana J. Fertig

cogena 1.14.0

Zhilong Jia

coGPS 1.24.0

Yingying Wei

COHCAP 1.26.0

Charles Warden

coMET 1.12.0

Tiphaine Martin

COMPASS 1.18.1

Greg Finak

compcodeR 1.16.1

Charlotte Soneson

compEpiTools 1.14.1

Kamal Kishore

CompGO 1.16.0

Ashley J. Waardenberg

ComplexHeatmap 1.18.1

Zuguang Gu

CONFESS 1.8.0

Diana LOW

ConsensusClusterPlus 1.44.0

Matt Wilkerson

consensusOV 1.2.0

Benjamin Haibe-Kains

consensusSeekeR 1.8.0

Astrid Deschenes

contiBAIT 1.8.0

Kieran O'Neill

conumee 1.14.0

Volker Hovestadt

skipped

convert 1.56.0

Yee Hwa (Jean) Yang

copa 1.48.0

James W. MacDonald

copynumber 1.20.0

Gro Nilsen

CopywriteR 2.12.0

Thomas Kuilman

CoRegNet 1.18.0

Remy Nicolle

Cormotif 1.26.0

Yingying Wei

CorMut 1.22.0

Zhenpeng Li

CORREP 1.46.0

Dongxiao Zhu

coseq 1.4.0

Andrea Rau

cosmiq 1.14.0

David Fischer , Christian Panse

COSNet 1.14.0

Marco Frasca

CountClust 1.8.0

Kushal Dey

covEB 1.6.0

C. Pacini

CoverageView

...NOT SUPPORTED...

covRNA 1.6.0

Lara Urban

cpvSNP 1.12.0

Caitlin McHugh

cqn 1.26.0

Kasper Daniel Hansen

CRImage 1.28.0

Henrik Failmezger , Yinyin Yuan

CRISPRseek 1.20.0

Lihua Julie Zhu

crisprseekplus 1.6.0

Alper Kucukural

CrispRVariants 1.8.0

Helen Lindsay

crlmm 1.38.0

Benilton S Carvalho

crossmeta 1.6.0

Alex Pickering

CSAR 1.32.0

Jose M Muino

csaw 1.14.1

Aaron Lun

CSSP 1.18.0

Chandler Zuo

ctc 1.54.0

Antoine Lucas

CTDquerier 1.0.0

Carles Hernandez-Ferrer

ctsGE 1.6.1

Michal Sharabi-Schwager

cummeRbund 2.22.0

Loyal A. Goff

customProDB 1.20.2

Xiaojing Wang

CVE 1.6.0

Andreas Mock

cycle 1.34.0

Matthias Futschik

cydar 1.4.0

Aaron Lun

CytoDx 1.0.1

Zicheng Hu

cytofkit 1.12.0

Jinmiao Chen , Matthew Myint

skipped

cytolib 1.2.0

Mike Jiang

CytoML 1.6.5

Mike Jiang

dada2 1.8.0

Benjamin Callahan

dagLogo 1.18.0

Jianhong Ou

daMA 1.52.0

Jobst Landgrebe

DaMiRseq 1.4.2

Mattia Chiesa

DAPAR 1.12.11

Samuel Wieczorek

DART 1.28.0

Charles Shijie Zheng

~~DASC~~ 1.2.0

Haidong Yi

skipped

DBChIP 1.24.0

Kun Liang

dcGSA 1.8.0

Jiehuan sun

DChIPRep 1.10.0

Bernd Klaus

ddCt 1.36.0

Jitao David Zhang

ddPCRclust 1.0.1

Benedikt G. Brink

debrowser 1.8.5

Alper Kucukural

DECIPHER 2.8.1

Erik Wright

DEComplexDisease 1.0.0

Guofeng Meng

DeconRNASeq 1.22.0

Ting Gong

decontam 1.0.0

Benjamin Callahan

DEDS 1.54.0

Yuanyuan Xiao

DeepBlueR 1.6.0

Felipe Albrecht , Markus List

deepSNV 1.26.1

Moritz Gerstung

DEFormats 1.8.0

Andrzej Oleś

DEGraph

...NOT SUPPORTED...

DEGreport 1.16.0

Lorena Pantano

DEGseq 1.34.1

Likun Wang

DelayedArray 0.6.6

Hervé Pagès

DelayedMatrixStats 1.2.0

Peter Hickey

deltaGseg 1.20.0

Diana Low

DeMAND 1.10.0

Jung Hoon Woo , Mariano Alvarez

DEP 1.2.0

Arne Smits

derfinder 1.14.0

Leonardo Collado-Torres

skipped

derfinderHelper 1.14.0

Leonardo Collado-Torres

derfinderPlot 1.14.0

Leonardo Collado-Torres

DEScan2 1.0.0

Dario Righelli

DESeq 1.32.0

Simon Anders

DESeq2 1.20.0

Michael Love

DEsingle 1.0.5

Zhun Miao

destiny 2.10.2

Philipp Angerer

DEsubs 1.6.3

Aristidis G. Vrahatis , Panos Balomenos

DEXSeq 1.26.0

Alejandro Reyes

dexus 1.20.0

Guenter Klambauer

DFP 1.38.0

Rodrigo Alvarez-Glez

DiffBind 2.8.0

Rory Stark

diffcoexp 1.0.0

Wenbin Wei

diffcyt 1.0.10

Lukas M. Weber

diffGeneAnalysis 1.62.0

Choudary Jagarlamudi

diffHic 1.12.1

Aaron Lun

DiffLogo 2.4.0

Hendrik Treutler

diffloop 1.8.0

Caleb Lareau

diffuStats 0.104.0

Sergio Picart-Armada

diggit 1.12.0

Mariano J Alvarez

Director 1.6.0

Katherine Icay

DirichletMultinomial 1.22.0

Martin Morgan

discordant 1.4.0

Charlotte Siska

dks 1.26.0

Jeffrey T. Leek

DMCHMM 1.2.0

Farhad Shokoohi

DMRcaller 1.12.7

Nicolae Radu Zabet

DMRcate 1.16.0

Tim Peters

DMRforPairs 1.16.0

Martin Rijlaarsdam

DMRScan 1.6.0

Christian M Page

dmrseq 1.0.14

Keegan Korthauer

DNABarcodes 1.10.0

Tilo Buschmann

DNAcopy 1.54.0

Venkatraman E. Seshan

DNAshapeR 1.8.0

Tsu-Pei Chiu

DominoEffect 1.0.0

Marija Buljan

skipped

doppelgangR 1.8.0

Levi Waldron

DOQTL 1.16.2

Daniel Gatti

Doscheda 1.2.0

Bruno Contrino

DOSE 3.6.1

Guangchuang Yu

drawProteins 1.0.0

Paul Brennan

DRIMSeq 1.8.0

Malgorzata Nowicka

DriverNet 1.20.0

Jiarui Ding

DropletUtils 1.0.3

Aaron Lun

DrugVsDisease 2.22.0

j. Saez-Rodriguez

skipped

dSimer 1.6.0

Peng Ni

DSS 2.28.0

Hao Wu

DTA 2.26.0

Bjoern Schwalb

dualKS 1.40.0

Eric J. Kort

DupChecker 1.18.0

"Quanhu SHENG"

dupRadar

...NOT SUPPORTED...

dyebias 1.40.0

Philip Lijnzaad

DynDoc 1.58.0

Bioconductor Package Maintainer

EasyqpcR

ERROR (Bad DESCRIPTION file)

easyRNASeq 2.16.0

Nicolas Delhomme

EBarrays 2.44.0

Ming Yuan

EBcoexpress 1.24.0

John A. Dawson

EBImage 4.22.1

Andrzej Oleś

EBSEA 1.8.0

Arfa Mehmood

EBSeq 1.20.0

Ning Leng

EBSeqHMM 1.14.0

Ning Leng

ecolitk 1.52.0

Laurent Gautier

EDASeq 2.14.1

Davide Risso

EDDA 1.18.0

Chia Kuan Hui Burton , Niranjan Nagarajan

edge 2.12.2

John D. Storey , Andrew J. Bass

edgeR 3.22.5

Yunshun Chen , Aaron Lun , Mark Robinson , Davis McCarthy , Gordon Smyth

eegc 1.6.1

Xiaoyuan Zhou

EGAD 1.8.0

Sara Ballouz

EGSEA 1.8.0

Monther Alhamdoosh

eiR 1.20.0

Thomas Girke

eisa 1.32.0

Gabor Csardi

ELBOW 1.16.0

Graham Alvare , Xiangli Zhang

ELMER 2.4.4

Tiago Chedraoui Silva

EMDomics 2.10.0

Sadhika Malladi and Daniel Schmolze

EmpiricalBrownsMethod 1.8.0

David Gibbs

ENCODExplorer 2.6.0

Charles Joly Beauparlant

ENmix 1.16.0

Zongli Xu

EnrichedHeatmap 1.10.0

Zuguang Gu

EnrichmentBrowser 2.10.11

Ludwig Geistlinger

enrichplot 1.0.2

Guangchuang Yu

ensembldb 2.4.1

Johannes Rainer

ensemblVEP

...NOT SUPPORTED...

ENVISIONQuery 1.28.0

Alex Lisovich , Roger Day

EpiDISH 1.2.0

Shijie Charles Zheng

epigenomix 1.20.0

Hans-Ulrich Klein

epiNEM 1.4.0

Martin Pirkl

epivizr 2.10.0

Hector Corrada Bravo

epivizrChart 1.2.0

Hector Corrada Bravo

epivizrData 1.8.0

Hector Corrada Bravo

epivizrServer 1.8.1

Hector Corrada Bravo

epivizrStandalone 1.8.0

Hector Corrada Bravo

erccdashboard 1.14.0

Sarah Munro

erma 0.12.0

VJ Carey

esATAC 1.2.3

Zheng Wei , Wei Zhang

esetVis 1.6.3

Laure Cougnaud

eudysbiome 1.10.0

Xiaoyuan Zhou

EventPointer 1.4.0

Juan Pablo Romero

ExiMiR 2.22.0

Sylvain Gubian

exomeCopy 1.26.0

Michael Love

exomePeak 2.14.0

Lin Zhang , Lian Liu , Jia Meng

ExperimentHub 1.6.1

Bioconductor Package Maintainer

ExperimentHubData 1.6.0

Bioconductor Package Maintainer

explorase 1.44.0

Michael Lawrence

ExpressionAtlas 1.8.1

Suhaib Mohammed

ExpressionView 1.32.0

Gabor Csardi

fabia 2.26.0

Sepp Hochreiter

facopy 1.14.0

David Mosen-Ansorena

skipped

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skipped

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Alex Murison

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Mingxiang Teng

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Wei Hao , John D. Storey

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gCMAPWeb

...NOT SUPPORTED...

gCrisprTools 1.8.0

Peter Haverty

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Z. Wu

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Ruidong Li

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Mathieu Emily , Magalie Houee-Bigot

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Bioconductor Package Maintainer

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Jianhong Ou

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Bioconductor Package Maintainer

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Bioconductor Package Maintainer

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Shian Su

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...NOT SUPPORTED...

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Kevin Rue-Albrecht

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goseq 1.32.0

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Bioconductor Package Maintainer

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Bioconductor Package Maintainer

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Bioconductor Package Maintainer

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Bioconductor Package Maintainer

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HilbertVis 1.38.0

Simon Anders

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Simon Anders

hipathia 1.0.0

Marta R. Hidalgo

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...NOT SUPPORTED...

HiTC 1.24.0

Nicolas Servant

hmdbQuery 1.0.1

VJ Carey

HMMcopy 1.22.0

Daniel Lai , Sohrab Shah

hopach 2.40.0

Katherine S. Pollard

hpar 1.22.2

Laurent Gatto

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Heidi Dvinge

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Xin Wang

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htSeqTools 1.28.3

Oscar Reina

HTSFilter 1.20.0

Andrea Rau

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Demba Fofana

hyperdraw 1.32.0

Paul Murrell

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Bioconductor Package Maintainer

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Yingying Wei

iBBiG 1.24.0

Aedin Culhane

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Bioconductor Package Maintainer

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Weiliang Qiu

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Liang-Bo Wang

igvR 1.0.1

Paul Shannon

IHW 1.8.0

Nikos Ignatiadis

illuminaio 0.22.0

Kasper Daniel Hansen

imageHTS 1.30.0

Joseph Barry

skipped

IMAS 1.4.0

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Imetagene 1.10.0

Audrey Lemacon

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Minoo Ashtiani

skipped

ImmuneSpaceR 1.8.2

ImmuneSpace Package Maintainer

skipped

immunoClust 1.12.0

Till Soerensen

IMPCdata 1.16.0

Jeremy Mason

ImpulseDE 1.6.0

Jil Sander , Nir Yosef

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Bioconductor Package Maintainer

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skipped

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Federico Marini

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Qianxing Mo

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Florian P Breitwieser

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VJ Carey

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Marzia A Cremona

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Bioconductor Package Maintainer

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M L Zingaretti

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massiR 1.16.0

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MAST 1.6.1

Andrew McDavid

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Jan Sauer

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Tao Wang

MBASED 1.14.0

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mcaGUI 1.28.1

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Xiaogang Zhong

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Koki Tsuyuzaki

meshes 1.6.1

Guangchuang Yu

skipped

meshr 1.16.0

Koki Tsuyuzaki

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Raphael Aggio

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Zicheng Hu

metagene 2.12.2

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Josep Gregori

msmsTests 1.18.0

Josep Gregori i Font

MSnbase 2.6.4

Laurent Gatto

MSnID 1.14.0

Vlad Petyuk

msPurity 1.6.2

Thomas N. Lawson

MSstats 3.12.3

Meena Choi

MSstatsQC 1.2.0

Eralp Dogu

MSstatsQCgui 1.0.0

Eralp Dogu

Mulcom 1.30.0

Claudio Isella

MultiAssayExperiment 1.6.0

Marcel Ramos

multiClust 1.10.0

Nathan Lawlor

MultiDataSet 1.8.0

Carlos Ruiz-Arenas

MultiMed 2.2.0

Simina M. Boca

multiMiR 1.2.0

Matt Mulvahill

multiOmicsViz 1.4.0

Jing Wang

multiscan 1.40.0

Mizanur Khondoker

multtest 2.36.0

Katherine S. Pollard

muscle 3.22.0

Alex T. Kalinka

MutationalPatterns 1.6.1

Roel Janssen

MVCClass 1.54.0

Elizabeth Whalen

MWASTools 1.4.0

Andrea Rodriguez-Martinez , Rafael Ayala

mygene 1.16.2

Adam Mark, Cyrus Afrasiabi, Chunlei Wu

myvariant 1.10.0

Adam Mark, Chunlei Wu

mzID 1.18.0

Thomas Lin Pedersen

mzR 2.14.0

Steffen Neumann

NADfinder 1.4.0

Jianhong Ou

NanoStringDiff 1.10.0

tingting zhai ,hong wang

NanoStringQCPro 1.12.0

Robert Ziman

NarrowPeaks 1.24.0

Pedro Madrigal

ncdfFlow 2.26.0

Mike Jiang

NCIgraph

...NOT SUPPORTED...

ndexr 1.2.0

Florian Auer

nem 2.54.0

Holger Froehlich

netbenchmark 1.12.0

Pau Bellot

netbiov 1.14.0

Shailesh tripathi

nethet 1.12.0

Nicolas Staedler

NetPathMiner 1.16.0

Ahmed Mohamed

netprioR 1.6.0

Fabian Schmich

netReg 1.4.0

Simon Dirmeier

netresponse 1.40.0

Leo Lahti

NetSAM 1.20.0

Bing Zhang

netSmooth 1.0.2

Jonathan Ronen

networkBMA 2.20.0

Ka Yee Yeung

NGScopy 1.14.0

Xiaobei Zhao

nnNorm 2.44.0

Adi Laurentiu Tarca

NOISeq 2.24.0

Sonia Tarazona

nondetects 2.10.0

Valeriia Sherina

normalize450K 1.8.0

Jonathan Alexander Heiss

NormqPCR 1.26.0

James Perkins

normr 1.6.0

Johannes Helmuth

npGSEA 1.16.0

Jessica Larson

NTW 1.30.0

Yuanhua Liu

nucleoSim 1.8.0

Astrid Deschenes

nucleR 2.12.1

Ricard Illa

nudge 1.46.0

N. Dean

skipped

NuPoP 1.30.0

Ji-Ping Wang

occugene 1.40.0

Oliver Will

OCplus 1.54.0

Alexander Ploner

odseq 1.8.0

José Jiménez

OGSA 1.10.0

Michael F. Ochs

oligo 1.44.0

Benilton Carvalho

oligoClasses 1.42.0

Benilton Carvalho and Robert Scharpf

OLIN 1.58.0

Matthias Futschik

OLINgui 1.54.0

Matthias Futschik

OmaDB 1.0.1

Klara Kaleb , Adrian Altenhoff

omicade4 1.20.0

Chen Meng

OmicCircos 1.18.0

Ying Hu

omicplotR 1.0.1

Daniel Giguere

omicRexposome 1.2.0

Carles Hernandez-Ferrer

OmicsMarkeR 1.12.0

Charles E. Determan Jr.

omicsPrint 1.0.0

Davy Cats

Onassis 1.2.7

Eugenia Galeota

oncomix 1.2.0

Daniel Pique

OncoScore 1.8.0

Daniele Ramazzotti

OncoSimulR 2.10.0

Ramon Diaz-Uriarte

oneSENSE 1.2.0

Yong Kee Tan

~~ontoCAT~~ 1.32.0

Natalja Kurbatova

ontoProc 1.2.1

VJ Carey

openCyto 1.18.0

Mike Jiang

openPrimeR 1.2.0

Matthias Döring

openPrimeRui 1.2.0

Matthias Döring

~~OperaMate~~ 1.12.0

Chenglin Liu

skipped

oposSOM 1.18.0

Henry Loeffler-Wirth

oppar 1.8.0

Soroor Hediyeh zadeh

OPWeight 1.2.0

Mohamad Hasan

OrderedList 1.52.0

Claudio Lottaz

ORFik 1.0.0

Kornel Labun

Organism.dplyr 1.8.1

Martin Morgan

OrganismDbi 1.22.0

Biocore Data Team

OSAT 1.28.0

Li Yan

Oscope 1.10.0

Ning Leng

OTUbase 1.30.0

Daniel Beck

OutlierD 1.44.0

Sukwoo Kim

PAA 1.14.0

Michael Turewicz , Martin Eisenacher

PADOG 1.22.0

Adi Laurentiu Tarca

paircompviz 1.18.0

Michal Burda

pandaR 1.12.0

Joseph N. Paulson , Dan Schlauch

panelcn.mops 1.2.0

Gundula Povysil

~~PAnnBuilder~~ 1.44.0

Li Hong

skipped

panp 1.50.0

Peter Warren

PANR 1.26.0

Xin Wang

PanVizGenerator 1.8.0

Thomas Lin Pedersen

PAPi 1.20.0

Raphael Aggio

parglms 1.12.0

VJ Carey

parody 1.38.0

VJ Carey

Path2PPI 1.10.0

Oliver Philipp

pathifier 1.20.0

Assif Yitzhaky

PathNet 1.20.0

Jason B. Smith

PathoStat 1.6.1

Solaiappan Manimaran

pathprint 1.10.4

Sokratis Kariotis

pathRender 1.48.0

Vince Carey

pathVar 1.10.0

Samuel Zimmerman

pathview 1.20.0

Weijun Luo

PathwaySplice 1.4.0

Aimin Yan

paxtoolsr 1.14.0

Augustin Luna

skipped

Pbase 0.20.0

Sebastian Gibb

pbcmc 1.8.0

Cristobal Fresno

pcaExplorer 2.6.0

Federico Marini

pcaGoPromoter 1.24.0

Morten Hansen

pcaMethods 1.72.0

Henning Redestig

PCAN 1.8.0

Matthew Page and Patrice Godard

pcot2 1.48.0

Sarah Song

PCpheno 1.42.0

Nolwenn Le Meur

pcxn 2.2.0

Sokratis Kariotis

pdInfoBuilder 1.44.0

Benilton Carvalho

PECA 1.16.0

Tomi Suomi

pepStat 1.14.0

Gregory C Imholte

pepXMLTab 1.14.0

Xiaojing Wang

perturbatr 1.0.0

Simon Dirmeier

PGA 1.10.1

Bo Wen , Shaohang Xu

pgca 1.4.0

Gabriela Cohen-Freue

PGSEA 1.54.0

Karl Dykema

phantasus 1.0.2

Alexey Sergushichev

PharmacoGx 1.10.3

Benjamin Haibe-Kains

~~phenoDist~~ 1.28.0

Xian Zhang

skipped

phenopath 1.4.0

Kieran Campbell

phenoTest 1.28.0

Evarist Planet

PhenStat 2.17.0

Hamed Haselimashhadi

philr 1.6.0

Justin Silverman

phosphonormalizer 1.4.0

Sohrab Saraei

phyloseq 1.24.2

Paul J. McMurdie

Pi 1.8.0

Hai Fang

piano 1.20.1

Leif Varemo

pickgene 1.52.0

Brian S. Yandell

PICS 2.24.0

Renan Sauteraud

Pigengene 1.6.0

Habil Zare

PING 2.24.0

Renan Sauteraud

pint 1.30.0

Olli-Pekka Huovilainen

pkgDepTools 1.46.0

Bioconductor Core Team

plateCore 1.38.0

Errol Strain

plethy 1.18.0

Daniel Bottomly

plgem 1.52.0

Norman Pavelka

plier 1.50.0

Crispin Miller

PLPE 1.40.0

Soo-heang Eo

plrs 1.20.0

Gwenael G.R. Leday to

plw 1.40.0

Magnus Astrand

plyranges 1.0.3

Stuart Lee

pmm 1.12.0

Anna Drewek

podkat 1.12.0

Ulrich Bodenhofer

pogos 1.0.0

VJ Carey

polyester 1.16.0

Jack Fu , Jeff Leek

Polyfit 1.14.0

Conrad Burden

POST 1.4.0

Xueyuan Cao

PowerExplorer 1.0.1

Xu Qiao

powerTCR 1.0.0

Hillary Koch

PPInfer 1.6.0

Dongmin Jung

ppiStats 1.46.0

Bioconductor Package Maintainer

pqsfinder 1.8.0

Jiri Hon

prada 1.56.0

Florian Hahne

prebs 1.20.0

Karolis Uziela

PREDA 1.26.1

Francesco Ferrari

predictionet

...NOT SUPPORTED...

preprocessCore 1.42.0

Ben Bolstad

Prize 1.10.0

Daryanaz Dargahi

proBAMr 1.14.0

Xiaojing Wang

PROcess 1.56.0

Xiaochun Li

procoil 2.8.0

Ulrich Bodenhofer

ProCoNA 1.18.0

David L Gibbs

skipped

proFIA 1.6.0

Alexis Delabriere

profileScoreDist 1.8.0

Paal O. Westermark

progeny 1.2.0

Michael Schubert

pRoloc 1.20.2

Laurent Gatto

pRolocGUI 1.14.0

Laurent Gatto

PROMISE 1.32.0

Stan Pounds , Xueyuan Cao

PROPER 1.12.0

Hao Wu

PROPS 1.2.0

Lichy Han

Prostar 1.12.18

Samuel Wieczorek

prot2D 1.18.0

Sebastien Artigaud

proteinProfiles 1.20.0

Julian Gehring

ProteomicsAnnotationHubData 1.10.0

Laurent Gatto

proteoQC 1.16.0

Bo Wen

ProtGenerics 1.12.0

Laurent Gatto

PSEA 1.14.0

Alexandre Kuhn

psichomics 1.6.2

Nuno Saraiva-Agostinho

PSICQUIC 1.18.1

Paul Shannon

psygenet2r 1.12.0

Alba Gutierrez-Sacristan

puma 3.22.0

Xuejun Liu

PureCN 1.10.0

Markus Riester

pvac 1.28.0

Jun Lu , Pierre R. Bushel

pvca 1.20.0

Jianying LI

Pviz 1.14.0

Renan Sauteraud

PWMEnrich 4.16.0

Robert Stojnic

pwOmics 1.12.0

Maren Sitte

qcmetrics 1.18.0

Laurent Gatto

QDNAseq 1.16.0

Daoud Sie

qpcrNorm 1.38.0

Jessica Mar

qpgraph 2.14.0

Robert Castelo

qrqc 1.34.0

Vince Buffalo

qsea 1.6.0

Matthias Lienhard

QUALIFIER 1.24.1

Mike Jiang

quantro 1.14.0

Stephanie Hicks

quantsmooth 1.46.0

Jan Oosting

QuartPAC 1.12.1

Gregory Ryslik

QuasR 1.20.0

Michael Stadler

QuaternaryProd 1.14.0

Carl Tony Fakhry

QUBIC 1.8.0

Yu Zhang

qusage 2.14.0

Christopher Bolen

qvalue 2.12.0

John D. Storey , Andrew J. Bass

R3CPET 1.12.0

Mohamed Nadhir Djekidel

r3Cseq 1.26.0

Supat Thongjuea

R453Plus1Toolbox 1.30.0

Hans-Ulrich Klein

R4RNA 1.8.0

Daniel Lai

RaggedExperiment 1.4.0

Martin Morgan

rain 1.14.0

Paul F. Thaben

rama 1.54.0

Raphael Gottardo

RamiGO

...NOT SUPPORTED...

ramwas 1.4.0

Andrey A Shabalin

RandomWalkRestartMH 1.0.0

Alberto Valdeolivas Urbelz

randPack 1.26.0

Robert Gentleman

RankProd 3.6.0

Francesco Del Carratore

RareVariantVis 2.8.0

Tomasz Stokowy

Rariant 1.16.0

Julian Gehring

RbcBook1 1.48.0

Vince Carey

RBGL 1.56.0

Bioconductor Package Maintainer

RBioinf 1.40.0

Robert Gentleman

rBiopaxParser 2.20.0

Frank Kramer

RBM 1.12.0

Dongmei Li

Rbowtie 1.20.0

Michael Stadler

Rbowtie2 1.2.0

Zheng Wei

rbsurv 2.38.0

Soo-heang Eo

Rcade 1.22.0

Jonathan Cairns

RCAS 1.6.0

Bora Uyar

RCASPAR 1.26.0

Douaa Mugahid , Lars Kaderali

rcellminer 2.2.0

Augustin Luna , Vinodh Rajapakse

rCGH 1.10.0

Frederic Commo

Rchemcpp 2.18.0

Guenter Klambauer

RchyOptimyx 2.20.0

Adrin Jalali , Nima Aghaeepour

RcisTarget 1.0.2

Sara Aibar

Rcpi 1.16.2

Nan Xiao

RCy3 2.0.88

Alexander Pico , Tanja Muetze , Paul Shannon

RCyjs 2.2.2

Paul Shannon

RDAVIDWebService 1.18.0

Cristobal Fresno

rDGIdb 1.6.0

Thomas Thurnherr

Rdisop 1.40.0

Steffen Neumann

RDRToolbox 1.30.0

Christoph Bartenhagen

ReactomePA 1.24.0

Guangchuang Yu

readat 1.6.0

Richard Cotton

ReadqPCR 1.26.0

James Perkins

reb 1.58.0

Karl J. Dykema

recount 1.6.3

Leonardo Collado-Torres

recoup 1.8.0

Panagiotis Moulos

RedeR 1.28.0

Mauro Castro

REDseq 1.26.0

Lihua Julie Zhu

RefNet 1.16.0

Paul Shannon

RefPlus 1.50.0

Kai-Ming Chang

regioneR 1.12.0

Bernat Gel

regionReport 1.14.3

Leonardo Collado-Torres

regsplice 1.6.0

Lukas M. Weber

REMP 1.4.1

Yinan Zheng

Repitools 1.26.0

Mark Robinson

ReportingTools 2.20.0

Jason A. Hackney , Gabriel Becker

ReQON 1.26.0

Christopher Cabanski

restfulSE 1.2.3

Shweta Gopaulakrishnan

rexposome 1.2.0

Carles Hernandez-Ferrer

skipped

rfPred 1.18.0

Hugo Varet

rGADEM 2.28.0

Arnaud Droit

RGalaxy 1.24.0

Bioconductor Package Maintainer

Rgin 1.0.0

Hector Climente

RGMQL 1.0.2

Simone Pallotta

RGraph2js 1.8.0

Stephane Cano

Rgraphviz 2.24.0

Kasper Daniel Hansen

rGREAT 1.12.1

Zuguang Gu

RGSEA 1.14.0

Chengcheng Ma

rgsepd 1.12.0

Karl Stamm

rhdf5 2.24.0

Mike Smith

rhdf5client 1.2.3

Samuela Pollack

Rhdf5lib 1.2.1

Mike Smith

Rhtslib 1.12.1

Bioconductor Package Maintainer

rHVDM 1.46.0

Martino Barenco

RiboProfiling 1.10.0

A. Popa

riboSeqR 1.14.0

Thomas J. Hardcastle

RImmPort 1.8.0

Zicheng Hu , Ravi Shankar

Ringo 1.44.0

J. Toedling

RIPSeeker 1.20.0

Yue Li

Risa 1.22.0

Alejandra Gonzalez-Beltran

RITAN 1.4.2

Michael Zimmermann

RIVER 1.4.0

Yungil Kim

RJMCMCNucleosomes 1.4.0

Astrid Deschênes

RLMM 1.42.0

Nusrat Rabbee

Rmagpie 1.36.0

Camille Maumet

RMassBank 2.8.0

RMassBank at Eawag

skipped

rMAT

...NOT SUPPORTED...

RmiR 1.36.0

Francesco Favero

RNAdecay 1.0.2

Reed Sorenson

RNAinteract 1.28.0

Bernd Fischer

RNAither 2.28.0

Lars Kaderali

RNAprobR 1.12.0

Nikos Sidiropoulos

rnaseqcomp 1.10.0

Mingxiang Teng

rnaSeqMap 2.38.0

Michal Okoniewski

RNASeqPower 1.20.0

Terry M Therneau

RnaSeqSampleSize 1.12.0

Shilin Zhao

RnBeads 1.12.1

Fabian Mueller

Rnits 1.14.0

Dipen P. Sangurdekar

roar 1.16.0

Elena Grassi

ROC 1.56.0

Vince Carey

Roleswitch 1.18.0

Yue Li

rols 2.8.2

Laurent Gatto

ROntoTools 2.8.0

Calin Voichita

ropls 1.12.0

Etienne A. Thevenot

ROTS 1.8.0

Fatemeh Seyednasrollah

RPA 1.36.0

Leo Lahti

RProtoBufLib 1.2.0

Mike Jiang

RpsiXML 2.22.0

Jitao David Zhang

rpx 1.16.0

Laurent Gatto

Rqc 1.14.0

Welliton Souza

rqt 1.6.0

Ilya Y. Zhbannikov

rqubic 1.26.0

Jitao David Zhang

rRDP 1.14.0

Michael Hahsler

RRHO 1.20.0

Jonathan Rosenblatt

Rsamtools 1.32.3

Bioconductor Package Maintainer

rsbml 2.38.0

Michael Lawrence

RSeqAn 1.0.0

August Guang

rSFFreader

...NOT SUPPORTED...

Rsubread

...NOT SUPPORTED...

RSVSim 1.20.0

Christoph Bartenhagen

rTANDEM 1.20.0

Frederic Fournier

RTCA 1.32.0

Jitao David Zhang

RTCGA 1.10.0

Marcin Kosinski

RTCGAToolbox 2.10.0

Marcel Ramos

RTN 2.4.6

Mauro Castro

RTNduals 1.4.4

Mauro Castro , Clarice Groeneveld

RTNsurvival 1.4.5

Clarice Groeneveld , Mauro A. A. Castro

RTopper 1.26.0

Luigi Marchionni

rtracklayer 1.40.6

Michael Lawrence

Rtreemix 1.42.0

Jasmina Bogojeska

rTRM 1.18.0

Diego Diez

rTRMui 1.18.0

Diego Diez

runibic 1.2.5

Patryk Orzechowski

RUVcorr 1.12.0

Saskia Freytag

RUVnormalize 1.14.0

Laurent Jacob

RUVSeq 1.14.0

Davide Risso

RVS 1.2.1

Thomas Sherman

rWikiPathways 1.0.5

Egon Willighagen , Alexander Pico

S4Vectors 0.18.3

Bioconductor Package Maintainer

safe 3.20.0

William T. Barry

sagenhaft 1.50.0

Tim Beissbarth

SAGx 1.54.0

Per Broberg,

samExploreR

...NOT SUPPORTED...

sampleClassifier 1.4.0

Khadija El Amrani

SamSPECTRAL 1.34.0

Habil Zare

sangerseqR 1.16.0

Jonathon Hill

SANTA 2.18.0

Alex J. Cornish

sapFinder 1.18.0

Shaohang Xu , Bo Wen

savR 1.18.0

R. Brent Calder

SBMLR 1.76.0

Tomas Radivoyevitch

SC3 1.8.0

Vladimir Kiselev

Scale4C 1.2.0

Carolin Walter

SCAN.UPC 2.22.0

Stephen R. Piccolo

scater 1.8.4

Davis McCarthy

scDD 1.4.0

Keegan Korthauer

scde 2.8.0

Jean Fan

scFeatureFilter 1.0.0

Guillaume Devailly

scfind 1.2.0

Vladimir Kiselev

ScISI 1.52.0

Tony Chiang

scmap 1.2.0

Vladimir Kiselev

scmeth 1.0.1

Divy Kangeyan

SCnorm 1.2.1

Rhonda Bacher

scone 1.4.0

Michael Cole

Sconify 1.0.4

Tyler J Burns

scoreInvHap 1.2.1

Carlos Ruiz

scPipe 1.2.1

Luyi Tian

scran 1.8.4

Aaron Lun

scsR 1.16.0

Andrea Franceschini , Roger Meier , Christian von Mering

SDAMS 1.0.0

Yuntong Li

segmentSeq 2.14.0

Thomas J. Hardcastle

SELEX 1.12.0

Harmen Bussemaker

SemDist 1.14.0

Ian Gonzalez

semisup 1.4.0

Armin Rauschenberger

SEPA 1.10.0

Zhicheng Ji

SEPIRA 1.0.2

Yuting Chen

seq2pathway 1.12.0

Xinan Yang with contribution from Lorenzo Pesce and Ana Marija Sokovic

SeqArray 1.20.2

Xiuwen Zheng

seqbias 1.28.0

Daniel Jones

seqCAT 1.2.1

Erik Fasterius

seqCNA 1.26.0

David Mosen-Ansorena

seqcombo 1.2.0

Guangchuang Yu

SeqGSEA 1.20.0

Xi Wang

seqLogo 1.46.0

Oliver Bembom

seqPattern 1.12.0

Vanja Haberle

seqplots 1.18.0

Przemyslaw Stempor

seqsetvis 1.0.2

Joseph R Boyd

SeqSQC 1.2.0

Qian Liu

seqTools 1.14.0

Wolfgang Kaisers

SeqVarTools 1.18.0

Stephanie M. Gogarten

sevenbridges 1.10.5

Nan Xiao

sevenC 1.0.0

Jonas Ibn-Salem

SGSeq 1.14.0

Leonard Goldstein

shinyMethyl 1.16.0

Jean-Philippe Fortin

shinyTANDEM 1.18.0

Frederic Fournier

ShortRead 1.38.0

Bioconductor Package Maintainer

SIAMCAT 1.0.0

Konrad Zych

SICtools

...NOT SUPPORTED...

sigaR 1.28.0

Wessel N. van Wieringen

SigCheck 2.12.0

Rory Stark

SigFuge 1.18.0

Patrick Kimes

siggenes 1.54.0

Holger Schwender

sights 1.6.0

Elika Garg

signeR 1.6.1

Renan Valieris

signet 1.0.2

Alexandre Gouy

sigPathway 1.48.0

Weil Lai

sigsquared 1.12.0

UnJin Lee

SIM 1.50.0

Renee X. de Menezes

SIMAT 1.12.1

M. R. Nezami Ranjbar

SimBindProfiles 1.18.0

Bettina Fischer

similaRpeak 1.12.0

Astrid Deschenes

SIMLR 1.6.0

Daniele Ramazzotti

simpleaffy 2.56.0

Crispin Miller

simulatorZ 1.14.0

Yuqing Zhang

sincell 1.12.0

Miguel Julia , Antonio Rausell

SingleCellExperiment 1.2.0

Davide Risso

singleCellTK 1.0.3

David Jenkins

singscore 1.0.0

Ruqian Lyu

SISPA 1.10.0

Bhakti Dwivedi

sizepower 1.50.0

Weiliang Qiu

skewr 1.12.1

Ryan Putney

slalom 1.2.0

Davis McCarthy

SLGI 1.40.0

Nolwenn Le Meur

SLqPCR 1.46.0

Matthias Kohl

SMAP 1.44.0

Robin Andersson

SMITE 1.8.0

Neil Ari Wijetunga

SNAGEE 1.20.0

David Venet

snapCGH 1.50.0

John Marioni

snm 1.28.0

John D. Storey

SNPchip 2.26.0

Robert Scharpf

SNPediaR 1.6.0

David Montaner

skipped

SNPhood 1.10.0

Christian Arnold

SNPRelate 1.14.0

Xiuwen Zheng

snpStats 1.30.0

David Clayton

soGGi 1.12.0

Tom Carroll

SomaticSignatures 2.16.0

Julian Gehring

SpacePAC 1.18.3

Gregory Ryslik

sparseDOSSA 1.4.0

Boyu Ren, Emma Schwager

SparseSignatures 1.0.3

Luca De Sano

specL 1.14.0

Christian Panse , Witold E. Wolski

SpeCond 1.34.0

Florence Cavalli

SPEM 1.20.0

Xinyi YANG

SPIA 2.32.0

Adi Laurentiu Tarca

SpidermiR 1.10.0

Claudia Cava

spikeLI 2.40.0

Enrico Carlon

spkTools 1.36.0

Matthew N McCall

splatter 1.4.3

Luke Zappia

splicegear 1.52.0

Laurent Gautier

~~spliceR~~ 1.22.0

Johannes Waage

spliceSites 1.28.0

Wolfgang Kaisers

SplicingGraphs 1.20.0

H. Pagès

splineTimeR 1.8.0

Herbert Braselmann

SPLINTER 1.6.0

Diana Low

skipped

splots 1.46.0

Wolfgang Huber

SPONGE 1.2.0

Markus List

spotSegmentation 1.54.0

Chris Fraley

SQUADD 1.30.0

Martial Sankar

SRAdb 1.42.2

Jack Zhu

sRAP 1.20.0

Charles Warden

SRGnet 1.6.0

Isar Nassiri

srnadiff 1.0.0

Matthias Zytnicki

sscore 1.52.0

Richard Kennedy

sscu 2.10.0

Yu Sun

sSeq 1.18.0

Danni Yu

ssize 1.54.0

Gregory R. Warnes

SSPA 2.20.0

Maarten van Iterson

ssviz 1.14.0

Diana Low

stageR 1.2.22

Koen Van den Berge

STAN 2.8.0

Rafael Campos-Martin

staRank 1.22.0

Juliane Siebourg

StarBioTrek 1.6.0

Claudia Cava

Starr 1.36.0

Benedikt Zacher

STATegRa 1.16.1

David Gomez-Cabrero , Núria Planell

statTarget 1.10.0

Hemi Luan

stepNorm 1.52.0

Yuanyuan Xiao

Streamer 1.26.0

Martin Morgan

STRINGdb 1.20.0

Damian Szklarczyk

STROMA4 1.4.0

Sadiq Saleh

subSeq 1.10.0

Andrew J. Bass , John D. Storey

SummarizedBenchmark 1.0.4

Alejandro Reyes , Patrick Kimes

SummarizedExperiment 1.10.1

Bioconductor Package Maintainer

supraHex 1.18.0

Hai Fang

survcomp 1.30.0

Benjamin Haibe-Kains , Markus Schroeder , Catharina Olsen

Sushi 1.18.0

Douglas H Phanstiel

sva 3.28.0

Jeffrey T. Leek , John D. Storey

SVAPLSseq 1.6.0

Sutirtha Chakraborty

SVM2CRM 1.12.0

Guidantonio Malagoli Tagliazucchi

SWATH2stats 1.10.2

Peter Blattmann

SwathXtend 2.2.0

Jemma Wu

swfdr 1.6.0

Simina M. Boca , Jeffrey T. Leek

SwimR 1.18.0

Randy Blakely

switchBox 1.16.0

Bahman Afsari , Luigi Marchionni

switchde 1.6.0

Kieran Campbell

synapter 2.4.1

Laurent Gatto

synergyfinder 1.6.1

Liye He

synlet 1.10.0

Chunxuan Shao

systemPipeR 1.14.0

Thomas Girke

TargetScore 1.18.0

Yue Li

TargetSearch 1.36.1

Alvaro Cuadros-Inostroza

TarSeqQC 1.10.0

Gabriela Merino

TCC 1.20.1

Jianqiang Sun

TCGAbiolinks 2.8.4

Antonio Colaprico

TCGAbiolinksGUI 1.6.1

Tiago C. Silva

TCGAutils 1.0.1

Marcel Ramos

TCseq 1.4.0

Mengjun Wu

TDARACNE 1.30.0

Zoppoli Pietro

tenXplore 1.2.0

VJ Carey

TEQC 4.2.0

Manuela Hummel

ternarynet 1.24.0

Matthew N. McCall

TFARM 1.2.0

Liuba Nausicaa Martino

TFBSTools 1.18.0

Ge Tan

TFEA.ChIP 1.0.0

Laura Puente Santamaría

TFHAZ 1.2.0

Alberto Marchesi

TFutils 1.0.0

Shweta Gopaulakrishnan

tigre 1.34.0

Antti Honkela

tilingArray 1.58.0

Zhenyu Xu

timecourse 1.52.0

Yu Chuan Tai

timescape 1.4.0

Maia Smith

TIN 1.12.0

Bjarne Johannessen

TissueEnrich 1.0.7

Ashish Jain

TitanCNA 1.18.0

Gavin Ha , Sohrab P Shah

tkWidgets 1.58.0

J. Zhang

TMixClust 1.2.0

Monica Golumbeanu

TnT 1.2.0

Jialin Ma

tofsims 1.8.0

Lorenz Gerber

ToPASeq 1.14.1

Ludwig Geistlinger

topdownr 1.2.0

Sebastian Gibb

topGO 2.32.0

Adrian Alexa

TPP 3.8.5

Dorothee Childs

tracktables 1.14.0

Tom Carroll

trackViewer 1.16.1

Jianhong Ou

transcriptogramer 1.2.1

Diego Morais

transcriptR 1.8.0

Armen R. Karapetyan

tRanslatome 1.18.5

Toma Tebaldi , Erik Dassi

TransView 1.24.0

Julius Muller

traseR 1.10.0

li chen

treeio 1.4.3

Guangchuang Yu

trena 1.2.0

Paul Shannon

Trendy 1.2.11

Rhonda Bacher

triform 1.22.0

Thomas Carroll

trigger 1.26.0

John D. Storey

trio 3.18.0

Holger Schwender

triplex 1.20.0

Jiri Hon

tRNAscanImport 1.0.1

Felix GM Ernst

TRONCO 2.12.0

BIMIB Group

TSCAN 1.18.0

Zhicheng Ji

tspair 1.38.0

Jeffrey T. Leek

TSRchitect 1.8.9

R. Taylor Raborn

TSSi 1.26.0

Julian Gehring

TTMap 1.2.0

Rachel Jeitziner

TurboNorm 1.28.0

Maarten van Iterson

TVTB

...NOT SUPPORTED...

tweeDEseq 1.26.0

Juan R Gonzalez

twilight 1.56.0

Stefanie Scheid

twoddpcr 1.4.1

Anthony Chiu

tximport 1.8.0

Michael Love

TxRegInfra 1.0.1

VJ Carey

TypeInfo 1.46.0

Duncan Temple Lang

UNDO 1.22.0

Niya Wang

unifiedWMWqPCR 1.16.0

Joris Meys

UniProt.ws 2.20.4

Marc Carlson

Uniquorn 2.0.0

'Raik Otto'

uSORT 1.6.0

Hao Chen

VanillaICE 1.42.4

Robert Scharpf

variancePartition 1.10.4

Gabriel E. Hoffman

VariantAnnotation 1.26.1

Valerie Obenchain

VariantFiltering 1.16.0

Robert Castelo

VariantTools 1.22.0

Michael Lawrence

vbmp 1.48.0

Nicola Lama

Vega 1.28.0

Sandro Morganella

VegaMC 3.18.0

Sandro Morganella

vidger 1.0.0

Brandon Monier

viper 1.14.0

Mariano J Alvarez

vsn 3.48.1

Wolfgang Huber

vtpnet 0.20.0

VJ Carey

vulcan 1.2.0

Federico M. Giorgi

wateRmelon 1.24.0

Leo

wavClusteR 2.14.0

Federico Comoglio

waveTiling 1.22.0

Kristof De Beuf

weaver 1.46.0

Seth Falcon

webbioc 1.52.0

Colin A. Smith

widgetTools 1.58.0

Jianhua Zhang

wiggleplotr 1.4.0

Kaur Alasoo

XBSeq 1.12.0

Yuanhang Liu

xcms 3.2.0

Steffen Neumann

XDE 2.26.0

Robert Scharpf

xmapbridge 1.38.0

Chris Wirth

xps

...NOT SUPPORTED...

XVector 0.20.0

Hervé Pagès

yamss 1.6.0

Leslie Myint

YAPSA 1.6.0

Daniel Huebschmann

skipped

yaqcaffy 1.40.0

Laurent Gatto

yarn 1.6.0

Joseph N Paulson

zFPKM 1.2.0

Ron Ammar

zinbwave 1.2.0

Davide Risso

zlibbioc 1.26.0

Bioconductor Package Maintainer