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BUILD BIN report for PANR on tokay2

This page was generated on 2018-10-17 08:35:42 -0400 (Wed, 17 Oct 2018).

Package 1052/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PANR 1.26.0
Xin Wang
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/PANR
Branch: RELEASE_3_7
Last Commit: be77c58
Last Changed Date: 2018-04-30 10:35:21 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PANR
Version: 1.26.0
Command: rm -rf PANR.buildbin-libdir && mkdir PANR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PANR.buildbin-libdir PANR_1.26.0.tar.gz
StartedAt: 2018-10-17 06:46:12 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:46:33 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 21.2 seconds
RetCode: 0
Status:  OK  
PackageFile: PANR_1.26.0.zip
PackageFileSize: 2.009 MiB

Command output

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###
### Running command:
###
###   rm -rf PANR.buildbin-libdir && mkdir PANR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PANR.buildbin-libdir PANR_1.26.0.tar.gz
###
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install for i386

* installing *source* package 'PANR' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PANR'
    finding HTML links ... done
    BetaMixture-class                       html  
    PAN-class                               html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/PAN-class.Rd:21: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/PAN-class.Rd:85: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/PAN-class.Rd:85: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/PAN-class.Rd:89: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/PAN-class.Rd:89: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
    SNR2p                                   html  
    assoScore                               html  
    buildPAN                                html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/buildPAN.Rd:9: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/buildPAN.Rd:9: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/buildPAN.Rd:40: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/buildPAN.Rd:44: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
    cosineSim                               html  
    data-Bakal2007                          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/data-Bakal2007.Rd:29: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
    edgeWeight                              html  
    exportPAN                               html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/exportPAN.Rd:8: file link 'write.graph' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/exportPAN.Rd:8: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/exportPAN.Rd:31: file link 'write.graph' in package 'igraph' does not exist and so has been treated as a topic
    fitBM                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/fitBM.Rd:40: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
    fitNULL                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/fitNULL.Rd:25: file link 'dbeta' in package 'stats' does not exist and so has been treated as a topic
    infer                                   html  
    p2SNR                                   html  
    permNULL                                html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/permNULL.Rd:28: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic
    pvclustModule                           html  
    sigModules                              html  
    summarize                               html  
    view                                    html  
    viewLegend                              html  
    viewNestedModules                       html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewNestedModules.Rd:9: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewNestedModules.Rd:38: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
    viewPAN                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewPAN.Rd:10: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewPAN.Rd:28: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewPAN.Rd:42: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp0gscwJ/R.INSTALL15e07f092e71/PANR/man/viewPAN.Rd:60: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'PANR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PANR' as PANR_1.26.0.zip
* DONE (PANR)
In R CMD INSTALL
In R CMD INSTALL