Hao Chen
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/uSORT |
| Branch: RELEASE_3_7 |
| Last Commit: c2f7b0a |
| Last Changed Date: 2018-04-30 10:35:43 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:42:53 -0400 (Wed, 17 Oct 2018).
| Package 1528/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| uSORT 1.6.0 Hao Chen
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: uSORT |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/uSORT_1.6.0.tar.gz && rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=uSORT.buildbin-libdir uSORT_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL uSORT_1.6.0.zip && rm uSORT_1.6.0.tar.gz uSORT_1.6.0.zip |
| StartedAt: 2018-10-16 20:20:17 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:21:40 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 82.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/uSORT_1.6.0.tar.gz && rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=uSORT.buildbin-libdir uSORT_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL uSORT_1.6.0.zip && rm uSORT_1.6.0.tar.gz uSORT_1.6.0.zip
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install for i386
* installing *source* package 'uSORT' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible
** help
*** installing help indices
converting help for package 'uSORT'
finding HTML links ... done
EXP_to_CellDataSet html
Rwanderlust html
SPIN html
STS_sorting html
STS_sorting_wrapper html
STS_sortingcost html
autoSPIN html
clusterGenes1 html
compareModels1 html
diff_test_helper1 html
differentialGeneTest1 html
distance.function html
driving_force_gene_selection html
elbow_detection html
fluidigmSC_analyzeGeneDetection html
fluidigmSC_identifyExpOutliers html
fluidigmSC_isElementIgnoreCase html
fluidigmSC_readLinearExp html
fluidigmSC_removeGenesByLinearExpForAllType
html
fluidigmSC_removeGenesByLinearExpForAllType_log2
html
monocle_wrapper html
neighborhood_sorting html
neighborhood_sorting_wrapper html
neighborhood_sortingcost html
pca_gene_selection html
sWanderlust html
scattering_quantification_per_gene html
sorting_method_parameter_GUI html
summed_local_variance html
summed_local_variance_cyclical html
summed_local_variance_linear html
trajectory_landmarks html
uSORT html
uSORT_GUI html
uSORT_parameters_GUI html
uSORT_preProcess html
uSORT_sorting_wrapper html
uSORT_write_results html
variability_per_gene html
wanderlust_wrapper html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'uSORT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'uSORT' as uSORT_1.6.0.zip
* DONE (uSORT)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'uSORT' successfully unpacked and MD5 sums checked
In R CMD INSTALL