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INSTALL report for annaffy on tokay2

This page was generated on 2018-10-17 08:31:55 -0400 (Wed, 17 Oct 2018).

Package 48/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
annaffy 1.52.0
Colin A. Smith
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/annaffy
Branch: RELEASE_3_7
Last Commit: ef84030
Last Changed Date: 2018-04-30 10:34:57 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: annaffy
Version: 1.52.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/annaffy_1.52.0.tar.gz && rm -rf annaffy.buildbin-libdir && mkdir annaffy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annaffy.buildbin-libdir annaffy_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL annaffy_1.52.0.zip && rm annaffy_1.52.0.tar.gz annaffy_1.52.0.zip
StartedAt: 2018-10-16 18:54:26 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:55:20 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 54.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/annaffy_1.52.0.tar.gz && rm -rf annaffy.buildbin-libdir && mkdir annaffy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annaffy.buildbin-libdir annaffy_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL annaffy_1.52.0.zip && rm annaffy_1.52.0.tar.gz annaffy_1.52.0.zip
###
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install for i386

* installing *source* package 'annaffy' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'annaffy'
    finding HTML links ... done
    aaf.character                           html  
    aaf.goterm                              html  
    aaf.handler                             html  
    aaf.integer                             html  
    aaf.raw                                 html  
    aafChromLoc-class                       html  
    aafChromLoc                             html  
    aafChromosome-class                     html  
    aafChromosome                           html  
    aafCytoband-class                       html  
    aafCytoband                             html  
    aafDescription-class                    html  
    aafDescription                          html  
    aafExpr                                 html  
    aafGO-class                             html  
    aafGO                                   html  
    aafGOItem-class                         html  
    aafGenBank-class                        html  
    aafGenBank                              html  
    aafIntensity-class                      html  
    aafList-class                           html  
    aafLocusLink-class                      html  
    aafLocusLink                            html  
    aafPathway-class                        html  
    aafPathway                              html  
    aafPathwayItem-class                    html  
    aafProbe-class                          html  
    aafProbe                                html  
    aafPubMed-class                         html  
    aafPubMed                               html  
    aafSearchGO                             html  
    aafSearchText                           html  
    aafSigned-class                         html  
    aafSymbol-class                         html  
    aafSymbol                               html  
    aafTable-class                          html  
    aafTable                                html  
    aafTableAnn                             html  
    aafTableFrame                           html  
    aafTableInt                             html  
    aafUniGene-class                        html  
    aafUniGene                              html  
    chkPkgs                                 html  
    getCSS-methods                          html  
    getHTML-methods                         html  
    getTD-methods                           html  
    getText-methods                         html  
    getURL-methods                          html  
    is.annpkg                               html  
    selectorWidget                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'annaffy' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annaffy' as annaffy_1.52.0.zip
* DONE (annaffy)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'annaffy' successfully unpacked and MD5 sums checked
In R CMD INSTALL