Lorena Pantano
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/isomiRs |
| Branch: RELEASE_3_7 |
| Last Commit: 02c5527 |
| Last Changed Date: 2018-04-30 10:35:41 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:42:02 -0400 (Wed, 17 Oct 2018).
| Package 758/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| isomiRs 1.8.0 Lorena Pantano
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: isomiRs |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/isomiRs_1.8.0.tar.gz && rm -rf isomiRs.buildbin-libdir && mkdir isomiRs.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isomiRs.buildbin-libdir isomiRs_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL isomiRs_1.8.0.zip && rm isomiRs_1.8.0.tar.gz isomiRs_1.8.0.zip |
| StartedAt: 2018-10-16 20:33:56 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:35:30 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 93.3 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/isomiRs_1.8.0.tar.gz && rm -rf isomiRs.buildbin-libdir && mkdir isomiRs.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isomiRs.buildbin-libdir isomiRs_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL isomiRs_1.8.0.zip && rm isomiRs_1.8.0.tar.gz isomiRs_1.8.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 4089k 100 4089k 0 0 45.0M 0 --:--:-- --:--:-- --:--:-- 48.6M
install for i386
* installing *source* package 'isomiRs' ...
** R
** data
*** moving datasets to lazyload DB
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
** help
*** installing help indices
converting help for package 'isomiRs'
finding HTML links ... done
IsomirDataSeq html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/IsomirDataSeq.Rd:10: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
IsomirDataSeqFromFiles html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/IsomirDataSeqFromFiles.Rd:41: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
counts html
dat286.long html
design html
ego html
findTargets html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/findTargets.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/findTargets.Rd:14: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
gene_ex_rse html
isoCounts html
isoDE html
isoNetwork html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/isoNetwork.Rd:12: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/isoNetwork.Rd:15: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/isoNetwork.Rd:24: file link 'AnnotationDb' in package 'AnnotationDbi' does not exist and so has been treated as a topic
isoNorm html
isoPLSDA html
isoPLSDAplot html
isoPlot html
isoPlotNet html
isoPlotPosition html
isoSelect html
isoTop html
isomiRs-deprecated html
isomiRs-package html
ma_ex html
mirData html
mirTritation html
mirna2targetscan html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGa2Pi/R.INSTALL27f0771746a5/isomiRs/man/mirna2targetscan.Rd:13: file link 'AnnotationDb' in package 'AnnotationDbi' does not exist and so has been treated as a topic
mirna_ex_rse html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
In R CMD INSTALL
install for x64
* installing *source* package 'isomiRs' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
* MD5 sums
packaged installation of 'isomiRs' as isomiRs_1.8.0.zip
* DONE (isomiRs)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'isomiRs' successfully unpacked and MD5 sums checked
In R CMD INSTALL