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Package 191/294HostnameOS / ArchBUILDCHECKBUILD BIN
oligoClasses 1.4.0
Benilton Carvalho
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/oligoClasses
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: oligoClasses
Version: 1.4.0
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build oligoClasses
StartedAt: 2009-04-18 15:13:21 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 15:13:35 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 13.8 seconds
RetCode: 0
Status: OK
PackageFile: oligoClasses_1.4.0.tar.gz
PackageFileSize: 69.77 KiB

Command output

* checking for file 'oligoClasses/DESCRIPTION' ... OK
* preparing 'oligoClasses':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'oligoClasses' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'oligoClasses'
     Formats: text html latex example 
Note: removing empty section \seealso in file 'AffyGenePDInfo-class.Rd'
  AffyGenePDInfo-class              text    html    latex   example
Note: removing empty section \author in file 'DBPDInfo-class.Rd'
Note: removing empty section \note in file 'DBPDInfo-class.Rd'
Note: removing empty section \references in file 'DBPDInfo-class.Rd'
Note: removing empty section \seealso in file 'DBPDInfo-class.Rd'
  DBPDInfo-class                    text    html    latex   example
Note: removing empty section \note in file 'FeatureSet-class.Rd'
Note: removing empty section \references in file 'FeatureSet-class.Rd'
  FeatureSet-class                  text    html    latex
Note: removing empty section \note in file 'FeatureSetExtensions-class.Rd'
Note: removing empty section \references in file 'FeatureSetExtensions-class.Rd'
  FeatureSetExtensions-class        text    html    latex   example
Note: removing empty section \seealso in file 'GeneSTFeatureSet-class.Rd'
  GeneSTFeatureSet-class            text    html    latex   example
Note: removing empty section \author in file 'PDInfo-class.Rd'
Note: removing empty section \note in file 'PDInfo-class.Rd'
Note: removing empty section \references in file 'PDInfo-class.Rd'
Note: removing empty section \seealso in file 'PDInfo-class.Rd'
Note: removing empty section \section{Objects from the Class} in file 'PDInfo-class.Rd'
  PDInfo-class                      text    html    latex   example
  QuantificationSet-class           text    html    latex   example
Note: removing empty section \author in file 'SnpCallSet-methods.Rd'
Note: removing empty section \details in file 'SnpCallSet-methods.Rd'
Note: removing empty section \note in file 'SnpCallSet-methods.Rd'
Note: removing empty section \references in file 'SnpCallSet-methods.Rd'
Note: removing empty section \examples in file 'SnpCallSet-methods.Rd'
  SnpCallSet-methods                text    html    latex
  SnpCallSetPlus-class              text    html    latex   example
  SnpCnvFeatureSet-class            text    html    latex   example
  SnpCnvQSet-class                  text    html    latex   example
Note: removing empty section \author in file 'SnpCopyNumberSet-methods.Rd'
Note: removing empty section \details in file 'SnpCopyNumberSet-methods.Rd'
Note: removing empty section \note in file 'SnpCopyNumberSet-methods.Rd'
Note: removing empty section \references in file 'SnpCopyNumberSet-methods.Rd'
Note: removing empty section \examples in file 'SnpCopyNumberSet-methods.Rd'
Note: removing empty section \seealso in file 'SnpCopyNumberSet-methods.Rd'
  SnpCopyNumberSet-methods          text    html    latex
  SnpLevelSet-class                 text    html    latex   example
Note: removing empty section \author in file 'SnpQSet-class.Rd'
Note: removing empty section \note in file 'SnpQSet-class.Rd'
Note: removing empty section \references in file 'SnpQSet-class.Rd'
  SnpQSet-class                     text    html    latex   example
Note: removing empty section \author in file 'SnpSetExtensions-class.Rd'
Note: removing empty section \note in file 'SnpSetExtensions-class.Rd'
Note: removing empty section \references in file 'SnpSetExtensions-class.Rd'
  SnpSetExtensions-class            text    html    latex   example
  TilingQSet-class                  text    html    latex   example
  affyPlatforms                     text    html    latex   example
  calculateCopyNumber               text    html    latex
  chromosome                        text    html    latex
  db                                text    html    latex   example
  oligoSnpSet-methods               text    html    latex
Note: removing empty section \author in file 'platformDesign-class.Rd'
Note: removing empty section \note in file 'platformDesign-class.Rd'
Note: removing empty section \references in file 'platformDesign-class.Rd'
Note: removing empty section \seealso in file 'platformDesign-class.Rd'
  platformDesign-class              text    html    latex   example
  position                          text    html    latex
** building package indices ...
* DONE (oligoClasses)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'oligoClasses_1.4.0.tar.gz'