Britta Velten
| Snapshot Date: 2024-12-16 13:40 -0500 (Mon, 16 Dec 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 91803f0 |
| git_last_commit_date: 2024-10-29 10:33:50 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2024-12-17 11:39 -0500 (Tue, 17 Dec 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" | 4752 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" | 4466 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4420 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4375 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 893/2273 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.23.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.23.0 |
| Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.23.0.tar.gz |
| StartedAt: 2024-12-17 00:38:42 -0500 (Tue, 17 Dec 2024) |
| EndedAt: 2024-12-17 00:43:41 -0500 (Tue, 17 Dec 2024) |
| EllapsedTime: 298.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.23.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2024-10-21 r87258)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.23.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -DR_NO_REMAP -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.21-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.21-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.21-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.21-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.763
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.095
ELB improved by 274.668
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.703
ELB improved by 58.3924
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.891
ELB improved by 36.8114
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.966
ELB improved by 14.9256
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.509
ELB improved by 6.45714
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.377
ELB improved by 4.13159
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.792
ELB improved by 3.58485
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.184
ELB improved by 3.60851
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.377
ELB improved by 3.80665
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.394
ELB improved by 3.98316
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.452
ELB improved by 3.94189
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.908
ELB improved by 3.5443
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.047
ELB improved by 2.8612
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.913
ELB improved by 2.13379
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.366
ELB improved by 1.54688
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.23
ELB improved by 1.13574
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.37
ELB improved by 0.860576
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.694
ELB improved by 0.676037
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.144
ELB improved by 0.54981
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.682
ELB improved by 0.461198
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.285
ELB improved by 0.397286
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.935
ELB improved by 0.350041
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.621
ELB improved by 0.314401
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.334
ELB improved by 0.287086
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.068
ELB improved by 0.265888
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.819
ELB improved by 0.249267
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.582
ELB improved by 0.23611
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.357
ELB improved by 0.225597
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.14
ELB improved by 0.217117
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.929
ELB improved by 0.210221
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.725
ELB improved by 0.204584
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.525
ELB improved by 0.199981
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.329
ELB improved by 0.196266
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.135
ELB improved by 0.193354
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.944
ELB improved by 0.191205
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.754
ELB improved by 0.189804
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.565
ELB improved by 0.18915
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.376
ELB improved by 0.189245
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.186
ELB improved by 0.190085
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.994
ELB improved by 0.191662
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.8
ELB improved by 0.193968
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.603
ELB improved by 0.197001
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.402
ELB improved by 0.200788
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.197
ELB improved by 0.205393
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.986
ELB improved by 0.210938
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.768
ELB improved by 0.21761
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.543
ELB improved by 0.225666
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.307
ELB improved by 0.235404
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.06
ELB improved by 0.247093
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.799
ELB improved by 0.260794
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.523
ELB improved by 0.27609
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.232
ELB improved by 0.291781
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.926
ELB improved by 0.305781
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.61
ELB improved by 0.315394
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.293
ELB improved by 0.317879
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.981
ELB improved by 0.311098
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.687
ELB improved by 0.294249
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.419
ELB improved by 0.268457
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.182
ELB improved by 0.236628
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.98
ELB improved by 0.202454
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.81
ELB improved by 0.169251
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.671
ELB improved by 0.139289
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.557
ELB improved by 0.113706
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.465
ELB improved by 0.0927626
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.389
ELB improved by 0.0761658
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.325
ELB improved by 0.0633443
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.272
ELB improved by 0.0536261
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.225
ELB improved by 0.0463449
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.184
ELB improved by 0.0408964
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.148
ELB improved by 0.0367668
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.114
ELB improved by 0.0335461
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.083
ELB improved by 0.0309344
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.054
ELB improved by 0.028738
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.027
ELB improved by 0.0268539
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.002
ELB improved by 0.0252433
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.978
ELB improved by 0.0239001
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.955
ELB improved by 0.0228229
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.933
ELB improved by 0.0219971
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.912
ELB improved by 0.0213873
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.891
ELB improved by 0.0209391
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.871
ELB improved by 0.0205862
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.85
ELB improved by 0.0202602
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.83
ELB improved by 0.0199013
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.811
ELB improved by 0.0194663
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.792
ELB improved by 0.0189335
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.774
ELB improved by 0.0183019
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.756
ELB improved by 0.0175859
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.739
ELB improved by 0.0168074
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.723
ELB improved by 0.0159881
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.708
ELB improved by 0.0151437
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.694
ELB improved by 0.0142815
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.681
ELB improved by 0.0134023
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.668
ELB improved by 0.0125029
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.656
ELB improved by 0.0115816
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.646
ELB improved by 0.010641
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.636
ELB improved by 0.00969061
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-875.5
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.617
ELB improved by 290.882
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.022
ELB improved by 62.5956
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.465
ELB improved by 43.5571
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.697
ELB improved by 19.7674
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.269
ELB improved by 7.42774
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.586
ELB improved by 3.68326
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.148
ELB improved by 2.43839
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.207
ELB improved by 1.94058
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.489
ELB improved by 1.71852
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.887
ELB improved by 1.60131
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.362
ELB improved by 1.5254
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.894
ELB improved by 1.4682
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.471
ELB improved by 1.42244
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.086
ELB improved by 1.38562
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.731
ELB improved by 1.35459
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.408
ELB improved by 1.32308
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.125
ELB improved by 1.2829
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.897
ELB improved by 1.22851
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.735
ELB improved by 1.16155
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.645
ELB improved by 1.08984
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.624
ELB improved by 1.02152
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.663
ELB improved by 0.960872
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.755
ELB improved by 0.907483
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.899
ELB improved by 0.856551
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.096
ELB improved by 0.802474
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.352
ELB improved by 0.744072
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.667
ELB improved by 0.685691
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.033
ELB improved by 0.634036
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.437
ELB improved by 0.595199
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.863
ELB improved by 0.574294
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.286
ELB improved by 0.576982
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.676
ELB improved by 0.610543
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.997
ELB improved by 0.678528
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.232
ELB improved by 0.765275
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.385
ELB improved by 0.846474
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.458
ELB improved by 0.92745
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.478
ELB improved by 0.97945
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.551
ELB improved by 0.927155
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.751
ELB improved by 0.799732
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.082
ELB improved by 0.669783
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.506
ELB improved by 0.576087
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.550633
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.319
ELB improved by 0.635923
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.488
ELB improved by 0.830819
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.577
ELB improved by 0.911336
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.862
ELB improved by 0.714989
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.386
ELB improved by 0.475586
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.07
ELB improved by 0.316052
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.853
ELB improved by 0.217204
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.698
ELB improved by 0.154993
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.582
ELB improved by 0.116016
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.491
ELB improved by 0.0907234
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.419
ELB improved by 0.0727739
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.36
ELB improved by 0.0587322
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.313
ELB improved by 0.0472037
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.275
ELB improved by 0.0378641
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.244
ELB improved by 0.0306245
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.219
ELB improved by 0.0252348
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.198
ELB improved by 0.0213046
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.179
ELB improved by 0.0184507
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.163
ELB improved by 0.0163807
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.148
ELB improved by 0.0149034
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.134
ELB improved by 0.0139106
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.121
ELB improved by 0.0133592
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.107
ELB improved by 0.0132605
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.094
ELB improved by 0.0136766
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.079
ELB improved by 0.0147174
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.062
ELB improved by 0.0165251
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.043
ELB improved by 0.0192253
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.02
ELB improved by 0.0228135
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.993
ELB improved by 0.0269676
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.963
ELB improved by 0.0308728
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.929
ELB improved by 0.033297
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.896
ELB improved by 0.0331383
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.866
ELB improved by 0.030187
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.841
ELB improved by 0.0253575
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.82
ELB improved by 0.0200669
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.805
ELB improved by 0.0154023
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.793
ELB improved by 0.0117942
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.784
ELB improved by 0.00919407
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-863.881
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-606.417
ELB improved by 257.464
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-546.789
ELB improved by 59.628
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.102
ELB improved by 51.6865
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.227
ELB improved by 30.8752
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.857
ELB improved by 14.3703
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.167
ELB improved by 8.68957
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.057
ELB improved by 8.11008
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.438
ELB improved by 8.61918
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.183
ELB improved by 8.25517
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.767
ELB improved by 6.41538
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.717
ELB improved by 4.0507
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.42
ELB improved by 2.29641
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.075
ELB improved by 1.34493
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.205
ELB improved by 0.870586
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.584
ELB improved by 0.620579
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.107
ELB improved by 0.477228
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.718
ELB improved by 0.389311
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.385
ELB improved by 0.332876
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.089
ELB improved by 0.295586
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.819
ELB improved by 0.270534
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.565
ELB improved by 0.25361
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.323
ELB improved by 0.242265
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.088
ELB improved by 0.234875
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.858
ELB improved by 0.230409
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.629
ELB improved by 0.228227
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.401
ELB improved by 0.227971
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.172
ELB improved by 0.229496
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.939
ELB improved by 0.232826
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.701
ELB improved by 0.238131
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.455
ELB improved by 0.245718
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.199
ELB improved by 0.256028
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.929
ELB improved by 0.269648
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.642
ELB improved by 0.28728
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.333
ELB improved by 0.309603
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.996
ELB improved by 0.336819
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.628
ELB improved by 0.367701
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.23
ELB improved by 0.398488
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.806
ELB improved by 0.423253
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.369
ELB improved by 0.436969
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.931
ELB improved by 0.438364
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.502
ELB improved by 0.429025
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.091
ELB improved by 0.411083
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.704
ELB improved by 0.386498
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.347
ELB improved by 0.357265
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.022
ELB improved by 0.325467
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.729
ELB improved by 0.293084
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.467
ELB improved by 0.261742
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.234
ELB improved by 0.232537
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.028
ELB improved by 0.205986
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.846
ELB improved by 0.182132
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.685
ELB improved by 0.160747
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.544
ELB improved by 0.141519
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.42
ELB improved by 0.124169
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.311
ELB improved by 0.108482
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.217
ELB improved by 0.0943037
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.135
ELB improved by 0.0815215
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.065
ELB improved by 0.070064
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.005
ELB improved by 0.0598898
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.954
ELB improved by 0.0509698
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.911
ELB improved by 0.0432644
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.875
ELB improved by 0.0367053
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.843
ELB improved by 0.0311912
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.817
ELB improved by 0.0265957
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.794
ELB improved by 0.0227821
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.774
ELB improved by 0.0196182
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.757
ELB improved by 0.0169855
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.743
ELB improved by 0.0147838
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.73
ELB improved by 0.0129315
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.718
ELB improved by 0.0113635
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.708
ELB improved by 0.0100284
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.699
ELB improved by 0.00888545
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.045
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.366
ELB improved by 265.679
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.095
ELB improved by 63.2716
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.281
ELB improved by 48.814
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.075
ELB improved by 25.2057
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.128
ELB improved by 9.94659
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.363
ELB improved by 4.76579
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.267
ELB improved by 3.09546
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.963
ELB improved by 2.30374
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.048
ELB improved by 1.91571
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.311
ELB improved by 1.73695
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.649
ELB improved by 1.66142
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.019
ELB improved by 1.63033
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.408
ELB improved by 1.61146
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.819
ELB improved by 1.58808
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.267
ELB improved by 1.55206
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.768
ELB improved by 1.49925
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.341
ELB improved by 1.42708
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.006
ELB improved by 1.3346
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.782
ELB improved by 1.22401
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.681
ELB improved by 1.10108
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.709
ELB improved by 0.972477
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.866
ELB improved by 0.84293
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.149
ELB improved by 0.716821
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.548
ELB improved by 0.600933
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.046
ELB improved by 0.502561
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.62
ELB improved by 0.425712
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.25
ELB improved by 0.369904
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.919
ELB improved by 0.331432
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.613
ELB improved by 0.305394
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.326
ELB improved by 0.287217
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.053
ELB improved by 0.273368
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.791
ELB improved by 0.261463
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.541
ELB improved by 0.250137
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.302
ELB improved by 0.238816
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.075
ELB improved by 0.227491
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.858
ELB improved by 0.216497
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.652
ELB improved by 0.206323
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.454
ELB improved by 0.197479
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.264
ELB improved by 0.190429
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.078
ELB improved by 0.18558
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.895
ELB improved by 0.183334
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.711
ELB improved by 0.184189
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.522
ELB improved by 0.188915
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.323
ELB improved by 0.1988
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.107
ELB improved by 0.215867
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.865
ELB improved by 0.242422
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.587
ELB improved by 0.278352
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.27
ELB improved by 0.316678
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.923
ELB improved by 0.347163
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.553
ELB improved by 0.369192
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.169
ELB improved by 0.384715
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.788
ELB improved by 0.380354
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.443
ELB improved by 0.345184
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.149
ELB improved by 0.294528
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.901
ELB improved by 0.24723
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.693
ELB improved by 0.208195
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.517
ELB improved by 0.176327
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.367
ELB improved by 0.150395
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.237
ELB improved by 0.129595
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.124
ELB improved by 0.113236
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.023
ELB improved by 0.100641
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.932
ELB improved by 0.0911787
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.848
ELB improved by 0.084282
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.768
ELB improved by 0.0794329
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.692
ELB improved by 0.0761227
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.618
ELB improved by 0.0738249
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.546
ELB improved by 0.071999
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.476
ELB improved by 0.0701295
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.408
ELB improved by 0.0677879
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.344
ELB improved by 0.0646943
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.283
ELB improved by 0.0607588
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.227
ELB improved by 0.0560845
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.176
ELB improved by 0.0509235
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.13
ELB improved by 0.0455925
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.09
ELB improved by 0.040385
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.054
ELB improved by 0.0355138
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.023
ELB improved by 0.0310971
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.996
ELB improved by 0.0271758
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.972
ELB improved by 0.0237406
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.952
ELB improved by 0.0207554
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.933
ELB improved by 0.0181732
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.917
ELB improved by 0.0159453
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.903
ELB improved by 0.0140254
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.891
ELB improved by 0.0123715
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.88
ELB improved by 0.0109466
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.87
ELB improved by 0.0097185
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.795 0.163 1.947
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.050 | 0.018 | 0.069 | |
| getPIPs | 0.043 | 0.021 | 0.064 | |
| graper | 0.082 | 0.021 | 0.103 | |
| makeExampleData | 0.008 | 0.003 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.024 | 0.002 | 0.025 | |
| plotELBO | 0.195 | 0.033 | 0.228 | |
| plotGroupPenalties | 0.639 | 0.022 | 0.661 | |
| plotPosterior | 0.495 | 0.015 | 0.510 | |
| predict.graper | 2.061 | 0.066 | 2.127 | |
| print.graper | 0.052 | 0.010 | 0.062 | |