Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2025-01-14 11:41 -0500 (Tue, 14 Jan 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" | 4767 |
palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" | 4487 |
lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4450 |
kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4405 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" | 4398 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 976/2281 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.13.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.13.0 |
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings HPiP_1.13.0.tar.gz |
StartedAt: 2025-01-13 22:54:17 -0500 (Mon, 13 Jan 2025) |
EndedAt: 2025-01-13 23:09:53 -0500 (Mon, 13 Jan 2025) |
EllapsedTime: 936.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings HPiP_1.13.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2024-10-21 r87258) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0 GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0 * running under: Ubuntu 24.04.1 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.13.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... INFO Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 35.186 0.431 35.617 FSmethod 33.632 0.401 34.034 corr_plot 33.272 0.513 33.794 pred_ensembel 12.625 0.227 11.604 enrichfindP 0.478 0.027 8.803 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.21-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 101.039855 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 104.405487 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.367215 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 96.741547 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.547670 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 95.073336 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 99.676185 iter 10 value 93.782087 iter 20 value 93.118336 iter 30 value 93.100579 iter 40 value 93.100530 final value 93.100528 converged Fitting Repeat 3 # weights: 305 initial value 100.006489 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 105.719889 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 98.675518 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 110.510436 iter 10 value 93.331343 iter 20 value 92.272572 iter 30 value 91.812808 iter 40 value 91.787120 final value 91.786990 converged Fitting Repeat 2 # weights: 507 initial value 101.396326 final value 93.356643 converged Fitting Repeat 3 # weights: 507 initial value 98.919049 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 96.508127 iter 10 value 93.836110 final value 93.836066 converged Fitting Repeat 5 # weights: 507 initial value 98.246973 iter 10 value 93.418684 iter 20 value 93.410445 final value 93.410437 converged Fitting Repeat 1 # weights: 103 initial value 100.191993 iter 10 value 94.053831 iter 20 value 92.476551 iter 30 value 89.157734 iter 40 value 88.279696 iter 50 value 86.047465 iter 60 value 85.533211 iter 70 value 84.562756 iter 80 value 84.395417 iter 90 value 84.385839 iter 100 value 84.374119 final value 84.374119 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.648154 iter 10 value 93.830577 iter 20 value 85.461815 iter 30 value 85.149200 iter 40 value 82.907623 iter 50 value 82.790442 iter 60 value 82.496405 iter 70 value 81.875731 iter 80 value 81.798855 iter 90 value 81.578934 iter 100 value 81.186922 final value 81.186922 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 98.474670 iter 10 value 94.056955 iter 20 value 94.056505 iter 30 value 94.054910 iter 40 value 93.689637 iter 50 value 93.506884 iter 60 value 93.266067 iter 70 value 89.052970 iter 80 value 88.832170 iter 90 value 87.237128 iter 100 value 85.174163 final value 85.174163 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 102.957185 iter 10 value 94.061071 iter 20 value 94.055066 iter 30 value 93.877616 iter 40 value 93.501714 iter 50 value 93.275780 iter 60 value 91.758080 iter 70 value 83.728847 iter 80 value 82.710082 iter 90 value 82.298071 iter 100 value 82.145601 final value 82.145601 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 101.810136 iter 10 value 93.700583 iter 20 value 93.533304 iter 30 value 93.216510 iter 40 value 91.410430 iter 50 value 88.679714 iter 60 value 82.736308 iter 70 value 81.736721 iter 80 value 81.352701 iter 90 value 81.020496 iter 100 value 80.993811 final value 80.993811 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 113.861761 iter 10 value 94.053387 iter 20 value 89.239007 iter 30 value 84.839329 iter 40 value 82.119796 iter 50 value 80.968426 iter 60 value 80.388244 iter 70 value 80.241831 iter 80 value 80.042137 iter 90 value 79.898248 iter 100 value 79.819133 final value 79.819133 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.349023 iter 10 value 93.926192 iter 20 value 86.836619 iter 30 value 86.133791 iter 40 value 84.573888 iter 50 value 83.939269 iter 60 value 83.624255 iter 70 value 83.422001 iter 80 value 82.186295 iter 90 value 80.044301 iter 100 value 79.665379 final value 79.665379 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.450168 iter 10 value 92.985514 iter 20 value 91.140776 iter 30 value 86.234679 iter 40 value 84.400355 iter 50 value 83.799121 iter 60 value 82.749908 iter 70 value 81.562668 iter 80 value 81.397688 iter 90 value 81.236948 iter 100 value 81.201748 final value 81.201748 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.284722 iter 10 value 94.195389 iter 20 value 89.473123 iter 30 value 85.347630 iter 40 value 85.037329 iter 50 value 84.718401 iter 60 value 84.407270 iter 70 value 83.887217 iter 80 value 83.275863 iter 90 value 81.882563 iter 100 value 81.638804 final value 81.638804 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.693781 iter 10 value 94.178053 iter 20 value 87.929727 iter 30 value 84.157746 iter 40 value 83.015466 iter 50 value 82.505395 iter 60 value 82.213598 iter 70 value 81.475897 iter 80 value 81.020888 iter 90 value 80.832651 iter 100 value 80.543896 final value 80.543896 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.612055 iter 10 value 93.719966 iter 20 value 89.237679 iter 30 value 83.908188 iter 40 value 83.173212 iter 50 value 82.310890 iter 60 value 82.217260 iter 70 value 81.652837 iter 80 value 81.530956 iter 90 value 81.437088 iter 100 value 81.359410 final value 81.359410 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 112.435923 iter 10 value 93.973115 iter 20 value 86.909599 iter 30 value 82.857043 iter 40 value 81.771079 iter 50 value 80.764300 iter 60 value 80.562369 iter 70 value 80.449819 iter 80 value 79.814776 iter 90 value 79.756447 iter 100 value 79.548174 final value 79.548174 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.123730 iter 10 value 92.452979 iter 20 value 88.383720 iter 30 value 85.647880 iter 40 value 85.257929 iter 50 value 84.861121 iter 60 value 84.084894 iter 70 value 81.376645 iter 80 value 80.321979 iter 90 value 80.117626 iter 100 value 79.690262 final value 79.690262 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.868293 iter 10 value 94.015200 iter 20 value 93.394916 iter 30 value 91.467276 iter 40 value 86.101990 iter 50 value 82.587397 iter 60 value 82.031342 iter 70 value 81.108223 iter 80 value 80.665992 iter 90 value 80.383171 iter 100 value 80.068490 final value 80.068490 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 116.523043 iter 10 value 94.182517 iter 20 value 93.502166 iter 30 value 93.338611 iter 40 value 87.129443 iter 50 value 83.048324 iter 60 value 82.177983 iter 70 value 80.647860 iter 80 value 80.220935 iter 90 value 79.976670 iter 100 value 79.882804 final value 79.882804 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 101.047030 iter 10 value 93.584425 iter 20 value 93.583598 iter 30 value 93.546787 iter 40 value 85.677790 iter 50 value 85.644300 iter 60 value 85.631763 iter 70 value 85.631707 iter 80 value 85.631601 iter 90 value 85.622265 iter 100 value 84.735570 final value 84.735570 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 95.171072 final value 94.054721 converged Fitting Repeat 3 # weights: 103 initial value 95.119790 final value 94.054442 converged Fitting Repeat 4 # weights: 103 initial value 94.835064 final value 94.054484 converged Fitting Repeat 5 # weights: 103 initial value 101.873625 iter 10 value 94.054593 iter 20 value 94.052966 final value 94.052917 converged Fitting Repeat 1 # weights: 305 initial value 98.653719 iter 10 value 94.057912 iter 20 value 94.052338 iter 30 value 93.603103 final value 93.583359 converged Fitting Repeat 2 # weights: 305 initial value 95.938597 iter 10 value 94.057054 iter 20 value 93.864617 iter 30 value 88.100521 iter 40 value 88.069533 iter 50 value 88.069319 iter 60 value 87.738446 iter 70 value 87.056877 iter 80 value 86.444258 iter 90 value 86.443857 iter 100 value 86.298254 final value 86.298254 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.540398 iter 10 value 93.899301 iter 20 value 93.539966 iter 30 value 93.269065 iter 40 value 84.007768 iter 50 value 82.151131 iter 60 value 81.398524 iter 70 value 81.079707 iter 80 value 81.072892 iter 90 value 81.071516 final value 81.071511 converged Fitting Repeat 4 # weights: 305 initial value 103.632221 iter 10 value 94.057589 iter 20 value 92.289964 iter 30 value 88.070655 iter 40 value 86.750177 iter 50 value 86.746370 iter 60 value 86.745637 iter 70 value 86.442940 iter 80 value 86.442312 final value 86.442263 converged Fitting Repeat 5 # weights: 305 initial value 113.463462 iter 10 value 94.057727 iter 20 value 93.690847 final value 93.582586 converged Fitting Repeat 1 # weights: 507 initial value 100.514632 iter 10 value 94.060181 iter 20 value 94.047976 iter 30 value 93.305114 final value 93.279755 converged Fitting Repeat 2 # weights: 507 initial value 105.946593 iter 10 value 93.591810 iter 20 value 93.585975 iter 30 value 93.584241 iter 40 value 93.582765 iter 50 value 92.569651 iter 60 value 87.806748 iter 70 value 87.543574 iter 80 value 87.258686 final value 87.197936 converged Fitting Repeat 3 # weights: 507 initial value 102.214679 iter 10 value 93.784400 iter 20 value 87.570511 iter 30 value 87.346566 iter 40 value 84.256904 iter 50 value 84.254180 iter 60 value 84.250823 iter 70 value 84.246360 iter 80 value 84.133746 iter 90 value 83.578770 iter 100 value 83.407550 final value 83.407550 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.413407 iter 10 value 93.688080 iter 20 value 93.590601 iter 30 value 93.346455 iter 40 value 87.640197 iter 50 value 85.152412 iter 60 value 84.949593 iter 70 value 84.874571 iter 80 value 84.873120 final value 84.873096 converged Fitting Repeat 5 # weights: 507 initial value 117.195923 iter 10 value 94.059066 iter 20 value 91.931436 iter 30 value 90.227531 iter 40 value 89.856686 iter 50 value 87.736385 iter 60 value 87.233534 final value 87.116862 converged Fitting Repeat 1 # weights: 103 initial value 98.921998 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.384813 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.086336 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 102.525241 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 94.614434 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 108.209566 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 98.605076 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 96.267604 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 106.067816 iter 10 value 93.398192 iter 20 value 89.280060 final value 89.279552 converged Fitting Repeat 5 # weights: 305 initial value 108.733095 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 97.778420 final value 94.467391 converged Fitting Repeat 2 # weights: 507 initial value 100.971270 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 120.074764 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 112.477152 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 98.252849 iter 10 value 93.735455 iter 20 value 92.896583 iter 30 value 92.896188 iter 30 value 92.896188 iter 30 value 92.896188 final value 92.896188 converged Fitting Repeat 1 # weights: 103 initial value 99.922562 iter 10 value 94.278718 iter 20 value 87.560197 iter 30 value 85.776521 iter 40 value 85.619606 iter 50 value 85.406184 iter 60 value 85.324886 final value 85.309087 converged Fitting Repeat 2 # weights: 103 initial value 96.916653 iter 10 value 94.488394 iter 20 value 94.475692 iter 30 value 94.392385 iter 40 value 90.791405 iter 50 value 89.970064 iter 60 value 88.172678 iter 70 value 86.567851 iter 80 value 83.889907 iter 90 value 83.513677 iter 100 value 83.512432 final value 83.512432 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.623362 iter 10 value 94.488708 iter 20 value 94.368598 iter 30 value 92.569903 iter 40 value 90.745003 iter 50 value 89.074513 iter 60 value 87.245873 iter 70 value 86.265172 iter 80 value 85.832381 iter 90 value 85.723168 final value 85.722883 converged Fitting Repeat 4 # weights: 103 initial value 97.157706 iter 10 value 94.486187 iter 20 value 92.962615 iter 30 value 89.797189 iter 40 value 88.825572 iter 50 value 87.126831 iter 60 value 86.517769 iter 70 value 85.902954 iter 80 value 84.443450 iter 90 value 84.194935 final value 84.192681 converged Fitting Repeat 5 # weights: 103 initial value 96.473303 iter 10 value 94.488496 iter 20 value 94.178872 iter 30 value 89.694737 iter 40 value 87.604984 iter 50 value 86.845663 iter 60 value 86.459536 final value 86.457946 converged Fitting Repeat 1 # weights: 305 initial value 105.218533 iter 10 value 94.528549 iter 20 value 94.496850 iter 30 value 94.485754 iter 40 value 90.028548 iter 50 value 87.552809 iter 60 value 86.106845 iter 70 value 85.662697 iter 80 value 85.467358 iter 90 value 85.182769 iter 100 value 84.981468 final value 84.981468 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.213303 iter 10 value 94.913425 iter 20 value 94.547908 iter 30 value 87.625812 iter 40 value 86.680517 iter 50 value 85.784523 iter 60 value 85.560842 iter 70 value 85.456203 iter 80 value 84.836865 iter 90 value 84.699986 iter 100 value 84.472718 final value 84.472718 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 116.912926 iter 10 value 94.835125 iter 20 value 90.582082 iter 30 value 88.151541 iter 40 value 87.455396 iter 50 value 86.746183 iter 60 value 86.129886 iter 70 value 85.946050 iter 80 value 85.907578 iter 90 value 85.388761 iter 100 value 84.270841 final value 84.270841 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 114.236566 iter 10 value 94.717613 iter 20 value 94.121812 iter 30 value 92.573764 iter 40 value 89.862902 iter 50 value 88.499966 iter 60 value 88.155747 iter 70 value 87.950061 iter 80 value 87.583570 iter 90 value 86.825324 iter 100 value 84.809584 final value 84.809584 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 101.383469 iter 10 value 94.634388 iter 20 value 94.487438 iter 30 value 87.864066 iter 40 value 86.261790 iter 50 value 85.784635 iter 60 value 85.400513 iter 70 value 84.443354 iter 80 value 83.763536 iter 90 value 83.050313 iter 100 value 82.105234 final value 82.105234 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 115.142010 iter 10 value 94.566982 iter 20 value 89.832090 iter 30 value 88.846329 iter 40 value 88.087586 iter 50 value 85.350348 iter 60 value 83.520309 iter 70 value 83.016437 iter 80 value 82.360592 iter 90 value 81.855326 iter 100 value 81.611871 final value 81.611871 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 124.515144 iter 10 value 99.173319 iter 20 value 95.983731 iter 30 value 87.817971 iter 40 value 85.950281 iter 50 value 84.460661 iter 60 value 83.225063 iter 70 value 82.397338 iter 80 value 82.155194 iter 90 value 82.030783 iter 100 value 81.885148 final value 81.885148 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.725054 iter 10 value 94.501677 iter 20 value 93.752254 iter 30 value 87.777067 iter 40 value 86.961359 iter 50 value 86.224940 iter 60 value 85.982997 iter 70 value 84.292884 iter 80 value 82.483748 iter 90 value 82.130432 iter 100 value 81.885356 final value 81.885356 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 126.892831 iter 10 value 94.459951 iter 20 value 88.039352 iter 30 value 87.491211 iter 40 value 87.065656 iter 50 value 85.110042 iter 60 value 83.176169 iter 70 value 82.398483 iter 80 value 82.103659 iter 90 value 81.989386 iter 100 value 81.891470 final value 81.891470 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 121.017334 iter 10 value 95.049214 iter 20 value 92.729676 iter 30 value 87.451703 iter 40 value 84.124592 iter 50 value 82.090042 iter 60 value 81.723552 iter 70 value 81.636222 iter 80 value 81.564716 iter 90 value 81.528051 iter 100 value 81.398983 final value 81.398983 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.081811 final value 94.485904 converged Fitting Repeat 2 # weights: 103 initial value 95.070225 iter 10 value 94.468991 iter 20 value 94.443926 iter 30 value 87.358707 iter 40 value 86.926188 iter 50 value 86.925261 iter 60 value 86.924339 iter 70 value 86.810923 iter 80 value 86.736174 iter 80 value 86.736174 iter 80 value 86.736174 final value 86.736174 converged Fitting Repeat 3 # weights: 103 initial value 95.457944 final value 94.485437 converged Fitting Repeat 4 # weights: 103 initial value 100.113005 final value 94.485617 converged Fitting Repeat 5 # weights: 103 initial value 95.514564 iter 10 value 93.473531 iter 20 value 92.955457 iter 30 value 92.475649 final value 92.392875 converged Fitting Repeat 1 # weights: 305 initial value 122.758612 iter 10 value 94.488701 iter 20 value 94.441433 iter 30 value 90.002820 iter 40 value 89.829482 final value 89.829044 converged Fitting Repeat 2 # weights: 305 initial value 96.156021 iter 10 value 94.432803 iter 20 value 94.256420 iter 30 value 87.255530 iter 40 value 87.249457 iter 50 value 87.228100 iter 60 value 86.600602 iter 70 value 84.938302 iter 80 value 84.670516 iter 90 value 84.664884 iter 100 value 84.586801 final value 84.586801 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 96.897160 iter 10 value 94.105780 iter 20 value 93.115246 iter 30 value 93.113655 iter 40 value 93.113091 iter 50 value 93.111896 final value 93.111098 converged Fitting Repeat 4 # weights: 305 initial value 104.864907 iter 10 value 94.489119 iter 20 value 92.665052 iter 30 value 87.180843 final value 86.699152 converged Fitting Repeat 5 # weights: 305 initial value 103.872665 iter 10 value 94.488923 iter 20 value 94.483594 iter 30 value 93.087955 iter 40 value 84.899023 iter 50 value 83.093187 iter 60 value 82.810610 iter 70 value 82.791128 iter 80 value 82.783448 iter 90 value 82.782633 iter 100 value 82.155495 final value 82.155495 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 95.940705 iter 10 value 93.798751 iter 20 value 92.874597 iter 30 value 92.867307 iter 40 value 92.864154 iter 50 value 92.863075 iter 60 value 92.861438 iter 70 value 92.857189 iter 80 value 92.565599 iter 90 value 88.040971 iter 100 value 83.908473 final value 83.908473 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.242210 iter 10 value 94.492069 iter 20 value 86.719938 iter 30 value 86.624711 iter 40 value 86.620348 iter 50 value 86.600366 iter 60 value 86.597260 iter 70 value 86.585385 iter 80 value 85.203830 iter 90 value 85.036909 iter 100 value 84.749271 final value 84.749271 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 114.358781 iter 10 value 94.492685 iter 20 value 94.483960 iter 30 value 94.363889 iter 40 value 92.947657 iter 50 value 92.146333 iter 60 value 89.943722 iter 70 value 89.821534 iter 80 value 89.813065 iter 90 value 89.787856 iter 100 value 89.530739 final value 89.530739 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.991959 iter 10 value 93.112023 iter 20 value 92.796532 iter 30 value 92.792080 final value 92.790388 converged Fitting Repeat 5 # weights: 507 initial value 98.696701 iter 10 value 94.475421 iter 20 value 94.304571 iter 30 value 89.264613 iter 40 value 87.169208 iter 50 value 86.975204 iter 60 value 86.752218 iter 70 value 86.716198 iter 80 value 86.710833 iter 90 value 86.692230 iter 100 value 86.614417 final value 86.614417 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.171986 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 96.683436 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 109.568132 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 99.949945 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 99.673834 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 94.132180 iter 10 value 92.306670 iter 20 value 92.301840 iter 30 value 91.949407 iter 40 value 91.918815 iter 50 value 91.897321 iter 60 value 91.896491 iter 60 value 91.896490 iter 60 value 91.896490 final value 91.896490 converged Fitting Repeat 2 # weights: 305 initial value 99.729500 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 99.243500 final value 93.701657 converged Fitting Repeat 4 # weights: 305 initial value 107.578768 final value 94.466823 converged Fitting Repeat 5 # weights: 305 initial value 95.276104 iter 10 value 93.487546 final value 93.459227 converged Fitting Repeat 1 # weights: 507 initial value 94.509536 final value 93.701657 converged Fitting Repeat 2 # weights: 507 initial value 110.337496 final value 94.466823 converged Fitting Repeat 3 # weights: 507 initial value 104.682251 final value 94.466821 converged Fitting Repeat 4 # weights: 507 initial value 100.595422 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 110.723727 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 105.558747 iter 10 value 92.891611 iter 20 value 83.621372 iter 30 value 82.261433 iter 40 value 82.027313 iter 50 value 81.954856 iter 60 value 79.912502 iter 70 value 79.440375 iter 80 value 79.329683 iter 90 value 79.306071 final value 79.306068 converged Fitting Repeat 2 # weights: 103 initial value 103.643425 iter 10 value 94.340848 iter 20 value 89.174872 iter 30 value 87.182394 iter 40 value 84.438426 iter 50 value 84.170871 iter 60 value 81.471740 iter 70 value 80.969332 iter 80 value 80.873212 final value 80.867522 converged Fitting Repeat 3 # weights: 103 initial value 107.890553 iter 10 value 94.441070 iter 20 value 87.352498 iter 30 value 86.139916 iter 40 value 85.705181 iter 50 value 85.693346 iter 60 value 85.367003 iter 70 value 82.198571 iter 80 value 80.881344 iter 90 value 80.868477 final value 80.867522 converged Fitting Repeat 4 # weights: 103 initial value 101.809405 iter 10 value 94.494561 iter 20 value 94.424985 iter 30 value 94.081375 iter 40 value 91.426528 iter 50 value 91.229737 iter 60 value 91.153749 iter 70 value 90.743433 iter 80 value 82.179720 iter 90 value 81.582597 iter 100 value 81.037791 final value 81.037791 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 104.548902 iter 10 value 94.396767 iter 20 value 92.443644 iter 30 value 90.105309 iter 40 value 90.036593 iter 50 value 89.849685 iter 60 value 89.563503 iter 70 value 89.562867 final value 89.562841 converged Fitting Repeat 1 # weights: 305 initial value 122.520470 iter 10 value 93.490141 iter 20 value 91.214438 iter 30 value 83.120459 iter 40 value 81.329914 iter 50 value 79.616645 iter 60 value 79.317387 iter 70 value 79.199535 iter 80 value 79.022733 iter 90 value 77.676517 iter 100 value 77.329823 final value 77.329823 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 111.241511 iter 10 value 87.676989 iter 20 value 84.476855 iter 30 value 82.304701 iter 40 value 82.054036 iter 50 value 80.985894 iter 60 value 80.297904 iter 70 value 80.180674 iter 80 value 80.108790 iter 90 value 79.979006 iter 100 value 79.749540 final value 79.749540 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.571445 iter 10 value 94.485462 iter 20 value 92.277779 iter 30 value 86.081982 iter 40 value 81.543061 iter 50 value 80.306028 iter 60 value 80.121512 iter 70 value 79.167657 iter 80 value 78.316327 iter 90 value 77.648020 iter 100 value 77.356435 final value 77.356435 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 102.777746 iter 10 value 95.213593 iter 20 value 91.904862 iter 30 value 87.811320 iter 40 value 86.910023 iter 50 value 84.116243 iter 60 value 83.943006 iter 70 value 82.639778 iter 80 value 81.283170 iter 90 value 80.627196 iter 100 value 78.888822 final value 78.888822 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 101.452044 iter 10 value 94.350552 iter 20 value 91.852722 iter 30 value 85.169009 iter 40 value 84.934194 iter 50 value 84.745275 iter 60 value 84.199558 iter 70 value 79.982646 iter 80 value 79.394750 iter 90 value 78.618851 iter 100 value 78.000713 final value 78.000713 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.608166 iter 10 value 88.985259 iter 20 value 82.553856 iter 30 value 82.062552 iter 40 value 81.507611 iter 50 value 81.406660 iter 60 value 79.473251 iter 70 value 78.869551 iter 80 value 77.382506 iter 90 value 76.828620 iter 100 value 76.674484 final value 76.674484 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 127.719497 iter 10 value 94.488700 iter 20 value 89.742123 iter 30 value 85.405984 iter 40 value 82.382827 iter 50 value 81.291953 iter 60 value 79.498211 iter 70 value 79.306123 iter 80 value 78.649637 iter 90 value 77.513727 iter 100 value 76.977290 final value 76.977290 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 101.854470 iter 10 value 88.643503 iter 20 value 82.738425 iter 30 value 81.912432 iter 40 value 79.785841 iter 50 value 78.290476 iter 60 value 78.178014 iter 70 value 77.931303 iter 80 value 77.380662 iter 90 value 77.026162 iter 100 value 76.709331 final value 76.709331 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.139327 iter 10 value 95.762647 iter 20 value 86.655743 iter 30 value 83.692150 iter 40 value 81.360117 iter 50 value 78.611304 iter 60 value 77.255545 iter 70 value 76.976035 iter 80 value 76.953398 iter 90 value 76.944140 iter 100 value 76.926540 final value 76.926540 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 136.312876 iter 10 value 97.983831 iter 20 value 94.664013 iter 30 value 88.978018 iter 40 value 85.917192 iter 50 value 85.390111 iter 60 value 84.892619 iter 70 value 79.764588 iter 80 value 78.095184 iter 90 value 77.608699 iter 100 value 77.138777 final value 77.138777 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 117.572586 final value 94.485684 converged Fitting Repeat 2 # weights: 103 initial value 98.563337 final value 94.485586 converged Fitting Repeat 3 # weights: 103 initial value 97.471787 final value 94.486296 converged Fitting Repeat 4 # weights: 103 initial value 98.512683 iter 10 value 94.485720 iter 20 value 94.483630 iter 30 value 84.642920 iter 40 value 83.562937 iter 40 value 83.562937 iter 40 value 83.562937 final value 83.562937 converged Fitting Repeat 5 # weights: 103 initial value 95.810274 iter 10 value 88.687119 iter 20 value 88.676767 iter 20 value 88.676767 final value 88.676767 converged Fitting Repeat 1 # weights: 305 initial value 109.781405 iter 10 value 85.000298 iter 20 value 84.978504 iter 30 value 82.197233 iter 40 value 81.936317 iter 50 value 81.933656 iter 60 value 81.277792 final value 81.264567 converged Fitting Repeat 2 # weights: 305 initial value 98.626902 iter 10 value 94.492248 iter 20 value 94.480626 iter 30 value 87.493354 iter 40 value 83.791062 iter 50 value 83.568077 iter 60 value 83.564851 iter 70 value 83.530152 iter 80 value 82.121331 iter 90 value 81.923096 iter 100 value 81.921074 final value 81.921074 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 95.978700 iter 10 value 94.471572 iter 20 value 94.456185 final value 93.702861 converged Fitting Repeat 4 # weights: 305 initial value 105.328695 iter 10 value 94.488878 iter 20 value 94.484338 iter 30 value 94.063011 iter 40 value 89.659048 iter 50 value 89.555403 final value 89.554429 converged Fitting Repeat 5 # weights: 305 initial value 99.803847 iter 10 value 94.489186 iter 20 value 94.479296 final value 94.467067 converged Fitting Repeat 1 # weights: 507 initial value 98.870595 iter 10 value 94.320318 iter 20 value 94.221558 iter 30 value 94.219337 iter 40 value 94.162386 iter 50 value 94.161883 iter 60 value 94.159814 final value 94.157337 converged Fitting Repeat 2 # weights: 507 initial value 106.860687 iter 10 value 94.320178 iter 20 value 91.289950 iter 30 value 81.464599 iter 40 value 81.441071 iter 50 value 77.862034 iter 60 value 77.479716 iter 70 value 77.479141 iter 80 value 77.478823 iter 90 value 77.478660 final value 77.478591 converged Fitting Repeat 3 # weights: 507 initial value 109.795678 iter 10 value 94.492033 iter 20 value 94.365425 iter 30 value 82.997844 iter 40 value 80.668335 iter 50 value 80.332020 iter 60 value 79.767979 iter 70 value 79.703993 iter 80 value 79.617188 iter 90 value 79.583717 iter 100 value 79.582319 final value 79.582319 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.880545 iter 10 value 94.277756 iter 20 value 92.403371 iter 30 value 92.169135 iter 40 value 92.158887 iter 50 value 92.158612 iter 60 value 92.157750 iter 70 value 89.868048 iter 80 value 88.827387 iter 90 value 88.807163 final value 88.805889 converged Fitting Repeat 5 # weights: 507 initial value 98.705069 iter 10 value 93.359031 iter 20 value 93.271798 iter 30 value 93.054483 iter 40 value 93.052231 iter 40 value 93.052230 final value 93.052230 converged Fitting Repeat 1 # weights: 103 initial value 94.538378 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 113.939178 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 96.134455 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 95.331940 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.794927 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 100.158374 iter 10 value 92.173831 final value 92.043182 converged Fitting Repeat 2 # weights: 305 initial value 105.094375 iter 10 value 93.289481 iter 20 value 93.088853 final value 93.087180 converged Fitting Repeat 3 # weights: 305 initial value 95.082976 final value 94.052909 converged Fitting Repeat 4 # weights: 305 initial value 106.746086 iter 10 value 92.701658 iter 10 value 92.701658 iter 10 value 92.701658 final value 92.701658 converged Fitting Repeat 5 # weights: 305 initial value 107.511618 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 99.092342 iter 10 value 93.328303 final value 93.328261 converged Fitting Repeat 2 # weights: 507 initial value 105.117421 final value 93.332522 converged Fitting Repeat 3 # weights: 507 initial value 94.527863 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 111.586007 iter 10 value 93.328379 final value 93.328261 converged Fitting Repeat 5 # weights: 507 initial value 107.228118 final value 94.052911 converged Fitting Repeat 1 # weights: 103 initial value 102.966578 iter 10 value 94.027521 iter 20 value 93.553360 iter 30 value 91.302614 iter 40 value 86.525889 iter 50 value 84.431150 iter 60 value 82.945406 iter 70 value 82.852618 iter 80 value 82.326286 iter 90 value 81.675174 iter 100 value 81.523607 final value 81.523607 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.857757 iter 10 value 94.055059 iter 20 value 93.793815 iter 30 value 93.103585 iter 40 value 89.368631 iter 50 value 88.776666 iter 60 value 88.715190 iter 70 value 86.460970 iter 80 value 82.511541 iter 90 value 82.098840 iter 100 value 81.587202 final value 81.587202 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.627688 iter 10 value 93.858102 iter 20 value 85.282371 iter 30 value 84.825310 iter 40 value 83.253165 iter 50 value 82.970777 iter 60 value 82.944700 iter 70 value 82.904538 iter 80 value 82.871170 iter 90 value 82.851597 iter 90 value 82.851597 iter 90 value 82.851597 final value 82.851597 converged Fitting Repeat 4 # weights: 103 initial value 96.844875 iter 10 value 94.123819 iter 20 value 87.416069 iter 30 value 85.152080 iter 40 value 83.942363 iter 50 value 81.907114 iter 60 value 81.681441 iter 70 value 81.492508 final value 81.492161 converged Fitting Repeat 5 # weights: 103 initial value 106.702802 iter 10 value 93.448478 iter 20 value 91.291817 iter 30 value 88.223616 iter 40 value 83.466754 iter 50 value 83.110697 iter 60 value 82.714309 iter 70 value 82.518118 iter 80 value 82.485168 iter 90 value 82.462708 final value 82.453624 converged Fitting Repeat 1 # weights: 305 initial value 102.784751 iter 10 value 94.001293 iter 20 value 87.666346 iter 30 value 85.286022 iter 40 value 84.855784 iter 50 value 84.473656 iter 60 value 82.161351 iter 70 value 81.851897 iter 80 value 81.751795 iter 90 value 81.460168 iter 100 value 80.939665 final value 80.939665 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.707411 iter 10 value 94.120638 iter 20 value 91.353124 iter 30 value 86.190568 iter 40 value 83.865374 iter 50 value 83.467133 iter 60 value 82.439664 iter 70 value 81.714034 iter 80 value 81.269519 iter 90 value 80.593345 iter 100 value 80.319987 final value 80.319987 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.321118 iter 10 value 93.129535 iter 20 value 85.637353 iter 30 value 83.517748 iter 40 value 82.614833 iter 50 value 82.375757 iter 60 value 81.121906 iter 70 value 80.620020 iter 80 value 80.416822 iter 90 value 80.331751 iter 100 value 80.264507 final value 80.264507 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.842205 iter 10 value 89.398881 iter 20 value 85.831260 iter 30 value 84.308395 iter 40 value 82.588822 iter 50 value 82.033823 iter 60 value 81.942479 iter 70 value 81.898994 iter 80 value 81.329747 iter 90 value 80.397326 iter 100 value 80.260141 final value 80.260141 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.732379 iter 10 value 94.004536 iter 20 value 85.614335 iter 30 value 83.305780 iter 40 value 83.097222 iter 50 value 82.650437 iter 60 value 82.622085 iter 70 value 82.404079 iter 80 value 81.650170 iter 90 value 80.877787 iter 100 value 80.499933 final value 80.499933 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.402261 iter 10 value 96.011801 iter 20 value 93.826053 iter 30 value 93.127831 iter 40 value 91.738497 iter 50 value 83.489533 iter 60 value 83.319175 iter 70 value 82.584302 iter 80 value 82.348667 iter 90 value 81.769794 iter 100 value 81.015267 final value 81.015267 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.365838 iter 10 value 94.081360 iter 20 value 93.313791 iter 30 value 91.097942 iter 40 value 87.513243 iter 50 value 85.792545 iter 60 value 83.736533 iter 70 value 81.437830 iter 80 value 81.132333 iter 90 value 80.715710 iter 100 value 80.386940 final value 80.386940 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 125.716508 iter 10 value 93.712181 iter 20 value 88.400951 iter 30 value 87.747317 iter 40 value 85.450960 iter 50 value 83.654009 iter 60 value 82.223064 iter 70 value 81.632716 iter 80 value 81.104664 iter 90 value 80.584426 iter 100 value 80.523803 final value 80.523803 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 121.260040 iter 10 value 94.393336 iter 20 value 87.523633 iter 30 value 84.755280 iter 40 value 82.938061 iter 50 value 82.676344 iter 60 value 82.630827 iter 60 value 82.630826 iter 70 value 81.530481 iter 80 value 80.819401 iter 90 value 80.659731 iter 100 value 80.597762 final value 80.597762 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 138.670426 iter 10 value 94.076228 iter 20 value 90.052775 iter 30 value 85.240316 iter 40 value 84.047606 iter 50 value 83.189847 iter 60 value 82.974799 iter 70 value 82.766356 iter 80 value 81.666592 iter 90 value 81.149462 iter 100 value 80.905468 final value 80.905468 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.344678 iter 10 value 94.054427 iter 20 value 94.031151 iter 30 value 92.704574 final value 92.702597 converged Fitting Repeat 2 # weights: 103 initial value 96.189217 final value 94.054588 converged Fitting Repeat 3 # weights: 103 initial value 98.417540 iter 10 value 94.054493 iter 20 value 93.706511 iter 30 value 93.226294 final value 93.226291 converged Fitting Repeat 4 # weights: 103 initial value 101.841230 final value 94.054771 converged Fitting Repeat 5 # weights: 103 initial value 105.967134 final value 94.054701 converged Fitting Repeat 1 # weights: 305 initial value 121.731515 iter 10 value 94.057609 iter 20 value 94.036668 iter 30 value 84.407682 iter 40 value 84.224039 iter 50 value 83.805974 iter 60 value 83.783222 iter 70 value 83.606107 iter 80 value 83.363242 iter 90 value 83.362625 iter 100 value 83.319671 final value 83.319671 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.947046 iter 10 value 94.058226 iter 20 value 93.980063 final value 93.329195 converged Fitting Repeat 3 # weights: 305 initial value 100.324970 iter 10 value 94.057981 iter 20 value 94.049818 iter 30 value 93.334006 iter 40 value 93.305814 iter 50 value 89.244629 iter 60 value 89.167350 iter 70 value 89.166834 iter 80 value 88.495111 iter 90 value 88.092393 final value 88.092390 converged Fitting Repeat 4 # weights: 305 initial value 95.718041 iter 10 value 93.334141 iter 20 value 93.330446 final value 93.328839 converged Fitting Repeat 5 # weights: 305 initial value 96.255721 iter 10 value 93.333325 iter 20 value 93.281969 iter 30 value 93.062331 iter 40 value 85.942599 iter 50 value 81.989713 iter 60 value 81.984286 iter 70 value 81.816832 iter 80 value 81.782840 iter 90 value 81.775686 iter 100 value 81.775341 final value 81.775341 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 96.378474 iter 10 value 94.060092 iter 20 value 85.714571 iter 30 value 84.127653 iter 40 value 83.967553 iter 50 value 81.374887 iter 60 value 80.871331 iter 70 value 80.129389 iter 80 value 79.472177 iter 90 value 78.771518 iter 100 value 78.578961 final value 78.578961 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.535711 iter 10 value 94.060320 iter 20 value 94.021099 iter 30 value 92.305787 iter 40 value 92.301777 iter 50 value 92.301411 iter 60 value 92.296816 iter 70 value 91.712304 iter 70 value 91.712304 iter 70 value 91.712304 final value 91.712304 converged Fitting Repeat 3 # weights: 507 initial value 128.359102 iter 10 value 93.337205 iter 20 value 93.333144 iter 30 value 93.328780 iter 40 value 91.724337 iter 50 value 87.099455 iter 60 value 84.392157 iter 70 value 83.666917 iter 80 value 83.627151 iter 90 value 83.624030 iter 100 value 83.598740 final value 83.598740 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.586963 iter 10 value 93.954132 iter 20 value 93.234042 iter 30 value 93.172435 iter 40 value 93.161014 final value 93.159499 converged Fitting Repeat 5 # weights: 507 initial value 102.752217 iter 10 value 93.125727 iter 20 value 93.118642 iter 30 value 93.111588 iter 40 value 93.053986 iter 50 value 86.048064 iter 60 value 81.456351 iter 70 value 79.644614 iter 80 value 79.368087 iter 90 value 79.219389 iter 100 value 79.211836 final value 79.211836 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.046020 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 102.973025 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.914361 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 103.482383 iter 10 value 92.687135 iter 20 value 92.683717 final value 92.683636 converged Fitting Repeat 5 # weights: 103 initial value 101.511633 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 104.839547 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 116.591459 iter 10 value 94.155895 final value 94.090583 converged Fitting Repeat 3 # weights: 305 initial value 94.895552 final value 94.288571 converged Fitting Repeat 4 # weights: 305 initial value 101.749582 final value 94.484210 converged Fitting Repeat 5 # weights: 305 initial value 96.323668 final value 94.252920 converged Fitting Repeat 1 # weights: 507 initial value 103.470644 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 95.641391 iter 10 value 88.991998 iter 20 value 87.601262 iter 30 value 86.846250 iter 40 value 86.836186 final value 86.835714 converged Fitting Repeat 3 # weights: 507 initial value 97.006825 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 95.139527 iter 10 value 93.556545 iter 20 value 85.776421 iter 30 value 84.781299 iter 40 value 84.587587 iter 50 value 84.069153 iter 60 value 82.749590 iter 70 value 82.736927 final value 82.736766 converged Fitting Repeat 5 # weights: 507 initial value 99.330769 iter 10 value 88.557226 iter 20 value 85.002948 iter 30 value 84.781060 final value 84.768209 converged Fitting Repeat 1 # weights: 103 initial value 100.502835 iter 10 value 94.472713 iter 20 value 93.914991 iter 30 value 93.886097 iter 40 value 91.854782 iter 50 value 84.123937 iter 60 value 83.214027 iter 70 value 82.995596 iter 80 value 82.191864 iter 90 value 82.094031 final value 82.093673 converged Fitting Repeat 2 # weights: 103 initial value 107.517438 iter 10 value 94.429057 iter 20 value 94.312196 iter 30 value 93.938323 iter 40 value 89.236102 iter 50 value 87.901135 iter 60 value 87.892664 iter 70 value 87.766124 iter 80 value 85.427093 iter 90 value 85.100167 final value 85.097820 converged Fitting Repeat 3 # weights: 103 initial value 97.373275 iter 10 value 93.866694 iter 20 value 90.386845 iter 30 value 89.920542 iter 40 value 88.965950 iter 50 value 88.935811 iter 60 value 88.921824 iter 70 value 88.737420 iter 80 value 86.413575 iter 90 value 83.924981 iter 100 value 83.425418 final value 83.425418 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.584701 iter 10 value 94.493431 iter 20 value 93.311048 iter 30 value 93.047231 iter 40 value 91.819009 iter 50 value 91.427030 iter 60 value 90.884082 iter 70 value 90.762498 iter 80 value 90.717131 final value 90.714345 converged Fitting Repeat 5 # weights: 103 initial value 108.828931 iter 10 value 94.419921 iter 20 value 87.718082 iter 30 value 86.689496 iter 40 value 85.541896 iter 50 value 85.039445 iter 60 value 85.028124 final value 85.028094 converged Fitting Repeat 1 # weights: 305 initial value 103.250922 iter 10 value 94.618215 iter 20 value 94.478785 iter 30 value 87.110448 iter 40 value 86.928032 iter 50 value 85.713988 iter 60 value 85.366395 iter 70 value 84.520785 iter 80 value 84.184497 iter 90 value 83.342236 iter 100 value 82.803109 final value 82.803109 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.795695 iter 10 value 94.491961 iter 20 value 94.416913 iter 30 value 89.663229 iter 40 value 85.776272 iter 50 value 85.099363 iter 60 value 82.467458 iter 70 value 81.887161 iter 80 value 81.506861 iter 90 value 81.428554 iter 100 value 80.987484 final value 80.987484 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 109.852474 iter 10 value 94.457081 iter 20 value 93.250328 iter 30 value 89.891723 iter 40 value 88.207304 iter 50 value 84.752015 iter 60 value 82.595721 iter 70 value 81.896829 iter 80 value 81.476370 iter 90 value 81.336188 iter 100 value 81.299319 final value 81.299319 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.812844 iter 10 value 94.225202 iter 20 value 91.200609 iter 30 value 89.693059 iter 40 value 85.659175 iter 50 value 84.020923 iter 60 value 82.995100 iter 70 value 82.516640 iter 80 value 82.011099 iter 90 value 81.406985 iter 100 value 81.206002 final value 81.206002 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.017132 iter 10 value 94.502270 iter 20 value 93.924855 iter 30 value 88.698340 iter 40 value 85.242986 iter 50 value 84.548675 iter 60 value 82.890943 iter 70 value 82.628195 iter 80 value 82.295268 iter 90 value 82.000305 iter 100 value 81.938705 final value 81.938705 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.622121 iter 10 value 95.155624 iter 20 value 94.413975 iter 30 value 92.293820 iter 40 value 91.989527 iter 50 value 91.126729 iter 60 value 83.356012 iter 70 value 82.477892 iter 80 value 82.009890 iter 90 value 81.300216 iter 100 value 80.862615 final value 80.862615 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 122.553081 iter 10 value 94.738632 iter 20 value 94.344761 iter 30 value 91.457439 iter 40 value 87.151747 iter 50 value 85.526377 iter 60 value 84.077547 iter 70 value 83.845913 iter 80 value 82.602049 iter 90 value 82.122464 iter 100 value 81.995493 final value 81.995493 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.455823 iter 10 value 96.001900 iter 20 value 94.579112 iter 30 value 93.330937 iter 40 value 88.518656 iter 50 value 85.381720 iter 60 value 83.869905 iter 70 value 83.659878 iter 80 value 83.056976 iter 90 value 82.662592 iter 100 value 82.178358 final value 82.178358 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.000943 iter 10 value 94.633209 iter 20 value 93.998647 iter 30 value 91.276641 iter 40 value 90.010719 iter 50 value 89.413663 iter 60 value 88.863115 iter 70 value 85.663331 iter 80 value 82.817163 iter 90 value 81.942380 iter 100 value 80.926647 final value 80.926647 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.401093 iter 10 value 94.551759 iter 20 value 92.894004 iter 30 value 91.114691 iter 40 value 89.766737 iter 50 value 87.498947 iter 60 value 85.174048 iter 70 value 83.281609 iter 80 value 82.958325 iter 90 value 82.511308 iter 100 value 82.162666 final value 82.162666 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.838869 final value 94.485735 converged Fitting Repeat 2 # weights: 103 initial value 103.961338 final value 94.485693 converged Fitting Repeat 3 # weights: 103 initial value 98.542172 final value 94.485838 converged Fitting Repeat 4 # weights: 103 initial value 96.249342 final value 94.485985 converged Fitting Repeat 5 # weights: 103 initial value 100.629358 final value 94.485747 converged Fitting Repeat 1 # weights: 305 initial value 102.970700 iter 10 value 94.488684 iter 20 value 94.477018 iter 30 value 91.203354 iter 40 value 91.196252 iter 50 value 88.382494 iter 60 value 86.311559 iter 70 value 86.015187 iter 80 value 84.677555 iter 90 value 84.676061 iter 100 value 82.670822 final value 82.670822 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 97.173189 iter 10 value 94.489136 iter 20 value 94.391098 iter 30 value 93.751507 iter 40 value 93.326888 iter 50 value 89.684547 iter 60 value 88.438925 iter 70 value 88.353796 iter 80 value 88.352739 final value 88.352669 converged Fitting Repeat 3 # weights: 305 initial value 109.847667 iter 10 value 94.471836 iter 20 value 94.467467 final value 94.467223 converged Fitting Repeat 4 # weights: 305 initial value 98.835255 iter 10 value 94.488863 iter 20 value 94.481420 iter 30 value 94.288742 final value 94.288649 converged Fitting Repeat 5 # weights: 305 initial value 105.579296 iter 10 value 89.191232 iter 20 value 87.595265 iter 30 value 87.593455 iter 40 value 87.592304 iter 50 value 87.460302 iter 60 value 83.581840 iter 70 value 82.931661 iter 80 value 82.931316 iter 80 value 82.931316 final value 82.931316 converged Fitting Repeat 1 # weights: 507 initial value 99.897712 iter 10 value 93.847361 iter 20 value 93.801126 iter 30 value 93.796734 iter 40 value 92.610364 iter 50 value 92.563968 iter 60 value 92.286982 iter 70 value 84.872367 iter 80 value 84.537323 iter 90 value 84.300972 iter 100 value 84.238568 final value 84.238568 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 95.097891 iter 10 value 87.632547 iter 20 value 86.171443 iter 30 value 86.168141 iter 40 value 86.167021 iter 50 value 86.157109 iter 60 value 86.081526 iter 70 value 86.071741 iter 80 value 86.047919 iter 90 value 85.972689 final value 85.971873 converged Fitting Repeat 3 # weights: 507 initial value 107.596152 iter 10 value 94.488182 iter 20 value 94.474053 iter 30 value 94.301767 iter 40 value 90.498313 iter 50 value 88.619938 iter 60 value 85.238225 iter 70 value 83.795208 iter 80 value 83.503677 iter 90 value 83.469560 final value 83.469113 converged Fitting Repeat 4 # weights: 507 initial value 98.882062 iter 10 value 94.475216 iter 20 value 94.424199 iter 30 value 92.943711 iter 40 value 91.556948 iter 50 value 91.354023 final value 91.278345 converged Fitting Repeat 5 # weights: 507 initial value 100.161281 iter 10 value 94.474300 iter 20 value 94.374219 iter 30 value 91.646510 iter 40 value 88.813226 iter 50 value 87.620907 iter 60 value 83.565410 iter 70 value 83.413840 iter 80 value 83.175903 iter 90 value 83.120923 iter 100 value 83.099285 final value 83.099285 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 140.080889 iter 10 value 117.895540 iter 20 value 117.886941 iter 30 value 116.741643 iter 40 value 115.472219 iter 50 value 109.600513 iter 60 value 108.517414 iter 70 value 108.506700 iter 80 value 108.505596 iter 90 value 108.503276 iter 100 value 108.503010 final value 108.503010 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 127.196042 iter 10 value 117.735280 iter 20 value 111.829438 iter 30 value 110.818829 iter 40 value 108.724716 iter 50 value 108.164304 iter 60 value 108.163225 iter 70 value 107.193963 iter 80 value 104.521034 iter 90 value 103.501832 iter 100 value 102.720571 final value 102.720571 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 121.394956 iter 10 value 117.895170 iter 20 value 117.890711 final value 117.890700 converged Fitting Repeat 4 # weights: 305 initial value 122.310615 iter 10 value 117.895029 iter 20 value 117.689549 iter 30 value 116.034160 iter 40 value 114.636281 iter 50 value 114.418930 final value 114.418902 converged Fitting Repeat 5 # weights: 305 initial value 142.834456 iter 10 value 117.895245 iter 20 value 116.341638 iter 30 value 116.196677 iter 40 value 116.146691 final value 116.114076 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Mon Jan 13 23:00:01 2025 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 39.242 1.111 132.624
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 33.632 | 0.401 | 34.034 | |
FreqInteractors | 0.204 | 0.013 | 0.217 | |
calculateAAC | 0.029 | 0.010 | 0.039 | |
calculateAutocor | 0.301 | 0.023 | 0.327 | |
calculateCTDC | 0.067 | 0.001 | 0.068 | |
calculateCTDD | 0.490 | 0.003 | 0.493 | |
calculateCTDT | 0.186 | 0.000 | 0.185 | |
calculateCTriad | 0.399 | 0.012 | 0.411 | |
calculateDC | 0.081 | 0.009 | 0.091 | |
calculateF | 0.292 | 0.003 | 0.295 | |
calculateKSAAP | 0.089 | 0.007 | 0.096 | |
calculateQD_Sm | 1.737 | 0.031 | 1.768 | |
calculateTC | 1.530 | 0.165 | 1.701 | |
calculateTC_Sm | 0.347 | 0.007 | 0.356 | |
corr_plot | 33.272 | 0.513 | 33.794 | |
enrichfindP | 0.478 | 0.027 | 8.803 | |
enrichfind_hp | 0.056 | 0.005 | 0.989 | |
enrichplot | 0.330 | 0.001 | 0.331 | |
filter_missing_values | 0.001 | 0.001 | 0.001 | |
getFASTA | 0.365 | 0.003 | 3.768 | |
getHPI | 0.000 | 0.000 | 0.001 | |
get_negativePPI | 0.001 | 0.001 | 0.001 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.000 | 0.001 | |
plotPPI | 0.065 | 0.003 | 0.067 | |
pred_ensembel | 12.625 | 0.227 | 11.604 | |
var_imp | 35.186 | 0.431 | 35.617 | |