Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:07:16 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for CountClust on riesling1


To the developers/maintainers of the CountClust package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CountClust.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 411/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CountClust 1.23.1  (landing page)
Kushal Dey
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/CountClust
git_branch: master
git_last_commit: 1b59fba
git_last_commit_date: 2021-11-15 13:34:05 -0400 (Mon, 15 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  OK    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: CountClust
Version: 1.23.1
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CountClust
StartedAt: 2022-03-17 15:30:38 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:31:43 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 64.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CountClust
###
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'CountClust' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CountClust'
    finding HTML links ... done
    AbundanceGoM                            html  
    BatchCorrectedCounts                    html  
    ExtractHighCorFeatures                  html  
    ExtractTopFeatures                      html  
    FitGoM                                  html  
    GTExV6Brain.FitGoM                      html  
    MouseDeng2014.FitGoM                    html  
    MouseJaitinSpleen.FitGoM                html  
    RemoveSparseFeatures                    html  
    StructureGGplot                         html  
    compGoM                                 html  
    compare_omega                           html  
    ex.counts                               html  
    handleNA                                html  
    nullmodel_GoM                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'CountClust' is deprecated and will be removed from
  Bioconductor version 3.16
** testing if installed package can be loaded from final location
Warning: Package 'CountClust' is deprecated and will be removed from
  Bioconductor version 3.16
** testing if installed package keeps a record of temporary installation path
* DONE (CountClust)
Making 'packages.html' ... done