Back to "Blame Jeroen" build/check report for BioC 3.11 |
This page was generated on 2020-04-15 03:20:12 -0400 (Wed, 15 Apr 2020).
These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html) |
TO THE DEVELOPERS/MAINTAINERS OF THE BiocNeighbors PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 16/89 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||
BiocNeighbors 1.5.4 Aaron Lun
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK |
Package: BiocNeighbors |
Version: 1.5.4 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/BiocNeighbors_1.5.4.tar.gz && rm -rf BiocNeighbors.buildbin-libdir && mkdir BiocNeighbors.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocNeighbors.buildbin-libdir BiocNeighbors_1.5.4.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL BiocNeighbors_1.5.4.zip && rm BiocNeighbors_1.5.4.tar.gz BiocNeighbors_1.5.4.zip |
StartedAt: 2020-04-14 18:04:44 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 18:08:17 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 213.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/BiocNeighbors_1.5.4.tar.gz && rm -rf BiocNeighbors.buildbin-libdir && mkdir BiocNeighbors.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocNeighbors.buildbin-libdir BiocNeighbors_1.5.4.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL BiocNeighbors_1.5.4.zip && rm BiocNeighbors_1.5.4.tar.gz BiocNeighbors_1.5.4.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 59233 100 59233 0 0 1259k 0 --:--:-- --:--:-- --:--:-- 1446k install for i386 * installing *source* package 'BiocNeighbors' ... ** using staged installation ** libs /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c annoy.cpp -o annoy.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_annoy.cpp -o build_annoy.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_hnsw.cpp -o build_hnsw.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_vptree.cpp -o build_vptree.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distances.cpp -o distances.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_annoy.cpp -o find_annoy.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_hnsw.cpp -o find_hnsw.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_kmknn.cpp -o find_kmknn.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_vptree.cpp -o find_vptree.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hnsw.cpp -o hnsw.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmknn.cpp -o kmknn.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_annoy.cpp -o query_annoy.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_hnsw.cpp -o query_hnsw.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_kmknn.cpp -o query_kmknn.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_vptree.cpp -o query_vptree.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c vptree.cpp -o vptree.o /mingw32/bin/g++ -shared -s -static-libgcc -o BiocNeighbors.dll tmp.def RcppExports.o annoy.o build_annoy.o build_hnsw.o build_vptree.o distances.o find_annoy.o find_hnsw.o find_kmknn.o find_vptree.o hnsw.o kmknn.o query_annoy.o query_hnsw.o query_kmknn.o query_vptree.o utils.o vptree.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/BiocNeighbors.buildbin-libdir/00LOCK-BiocNeighbors/00new/BiocNeighbors/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BiocNeighbors' finding HTML links ... done AnnoyIndex html AnnoyParam html BiocNeighborIndex html BiocNeighborParam html BiocNeighbors-algorithms html BiocNeighbors-raw-index html BiocNeighbors-ties html HnswIndex html HnswParam html KmknnIndex html KmknnParam html VptreeIndex html VptreeParam html buildAnnoy html buildHnsw html buildIndex html buildKmknn html buildVptree html find-methods html finding level-2 HTML links ... done findKNN html findNeighbors html query-methods html queryKNN html queryNeighbors html rangeFind-methods html rangeQuery-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'BiocNeighbors' ... ** libs /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c annoy.cpp -o annoy.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_annoy.cpp -o build_annoy.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_hnsw.cpp -o build_hnsw.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_vptree.cpp -o build_vptree.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distances.cpp -o distances.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_annoy.cpp -o find_annoy.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_hnsw.cpp -o find_hnsw.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_kmknn.cpp -o find_kmknn.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_vptree.cpp -o find_vptree.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hnsw.cpp -o hnsw.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmknn.cpp -o kmknn.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_annoy.cpp -o query_annoy.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_hnsw.cpp -o query_hnsw.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_kmknn.cpp -o query_kmknn.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c query_vptree.cpp -o query_vptree.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c vptree.cpp -o vptree.o /mingw64/bin/g++ -shared -s -static-libgcc -o BiocNeighbors.dll tmp.def RcppExports.o annoy.o build_annoy.o build_hnsw.o build_vptree.o distances.o find_annoy.o find_hnsw.o find_kmknn.o find_vptree.o hnsw.o kmknn.o query_annoy.o query_hnsw.o query_kmknn.o query_vptree.o utils.o vptree.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/BiocNeighbors.buildbin-libdir/BiocNeighbors/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'BiocNeighbors' as BiocNeighbors_1.5.4.zip * DONE (BiocNeighbors) * installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library' package 'BiocNeighbors' successfully unpacked and MD5 sums checked