Back to "Blame Jeroen" build/check report for BioC 3.11

BUILD BIN report for BiocNeighbors on tokay2

This page was generated on 2020-04-15 03:20:12 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE BiocNeighbors PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 16/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocNeighbors 1.5.4
Aaron Lun
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/BiocNeighbors
Branch: master
Last Commit: ca0b6f4
Last Changed Date: 2020-04-13 13:45:17 -0400 (Mon, 13 Apr 2020)
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]

Summary

Package: BiocNeighbors
Version: 1.5.4
Command: rm -rf BiocNeighbors.buildbin-libdir && mkdir BiocNeighbors.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocNeighbors.buildbin-libdir BiocNeighbors_1.5.4.tar.gz
StartedAt: 2020-04-15 00:00:42 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 00:04:40 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 238.6 seconds
RetCode: 0
Status:  OK  
PackageFile: BiocNeighbors_1.5.4.zip
PackageFileSize: 2.151 MiB

Command output

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### Running command:
###
###   rm -rf BiocNeighbors.buildbin-libdir && mkdir BiocNeighbors.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocNeighbors.buildbin-libdir BiocNeighbors_1.5.4.tar.gz
###
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install for i386

* installing *source* package 'BiocNeighbors' ...
** using staged installation
** libs
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c annoy.cpp -o annoy.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_annoy.cpp -o build_annoy.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_hnsw.cpp -o build_hnsw.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_vptree.cpp -o build_vptree.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c distances.cpp -o distances.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_annoy.cpp -o find_annoy.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_hnsw.cpp -o find_hnsw.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_kmknn.cpp -o find_kmknn.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_vptree.cpp -o find_vptree.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c hnsw.cpp -o hnsw.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c kmknn.cpp -o kmknn.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_annoy.cpp -o query_annoy.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_hnsw.cpp -o query_hnsw.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_kmknn.cpp -o query_kmknn.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_vptree.cpp -o query_vptree.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o
/mingw32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c vptree.cpp -o vptree.o
/mingw32/bin/g++ -shared -s -static-libgcc -o BiocNeighbors.dll tmp.def RcppExports.o annoy.o build_annoy.o build_hnsw.o build_vptree.o distances.o find_annoy.o find_hnsw.o find_kmknn.o find_vptree.o hnsw.o kmknn.o query_annoy.o query_hnsw.o query_kmknn.o query_vptree.o utils.o vptree.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/BiocNeighbors.buildbin-libdir/00LOCK-BiocNeighbors/00new/BiocNeighbors/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BiocNeighbors'
    finding HTML links ... done
    AnnoyIndex                              html  
    AnnoyParam                              html  
    BiocNeighborIndex                       html  
    BiocNeighborParam                       html  
    BiocNeighbors-algorithms                html  
    BiocNeighbors-raw-index                 html  
    BiocNeighbors-ties                      html  
    HnswIndex                               html  
    HnswParam                               html  
    KmknnIndex                              html  
    KmknnParam                              html  
    VptreeIndex                             html  
    VptreeParam                             html  
    buildAnnoy                              html  
    buildHnsw                               html  
    buildIndex                              html  
    buildKmknn                              html  
    buildVptree                             html  
    find-methods                            html  
    finding level-2 HTML links ... done

    findKNN                                 html  
    findNeighbors                           html  
    query-methods                           html  
    queryKNN                                html  
    queryNeighbors                          html  
    rangeFind-methods                       html  
    rangeQuery-methods                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BiocNeighbors' ...
** libs
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c annoy.cpp -o annoy.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_annoy.cpp -o build_annoy.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_hnsw.cpp -o build_hnsw.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c build_vptree.cpp -o build_vptree.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c distances.cpp -o distances.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_annoy.cpp -o find_annoy.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_hnsw.cpp -o find_hnsw.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_kmknn.cpp -o find_kmknn.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c find_vptree.cpp -o find_vptree.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c hnsw.cpp -o hnsw.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c kmknn.cpp -o kmknn.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_annoy.cpp -o query_annoy.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_hnsw.cpp -o query_hnsw.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_kmknn.cpp -o query_kmknn.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c query_vptree.cpp -o query_vptree.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o
/mingw64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/Rcpp/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppAnnoy/include' -I'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library/RcppHNSW/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c vptree.cpp -o vptree.o
/mingw64/bin/g++ -shared -s -static-libgcc -o BiocNeighbors.dll tmp.def RcppExports.o annoy.o build_annoy.o build_hnsw.o build_vptree.o distances.o find_annoy.o find_hnsw.o find_kmknn.o find_vptree.o hnsw.o kmknn.o query_annoy.o query_hnsw.o query_kmknn.o query_vptree.o utils.o vptree.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/BiocNeighbors.buildbin-libdir/BiocNeighbors/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocNeighbors' as BiocNeighbors_1.5.4.zip
* DONE (BiocNeighbors)