xmapbridge 1.0.0
Tim Yates
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/xmapbridge | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.3-bioc/meat/xmapbridge.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: UTF-8
* checking for file 'xmapbridge/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'xmapbridge' version '1.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'xmapbridge' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating xmapbridge-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/loc/home/biocbuild/bbs-2.3-bioc/meat/xmapbridge.Rcheck/tests'
Running 'xmapbridge_test.R'
make[1]: Leaving directory `/loc/home/biocbuild/bbs-2.3-bioc/meat/xmapbridge.Rcheck/tests'
OK
* checking package vignettes in 'inst/doc' ... OK
* creating xmapbridge-manual.tex ... OK
* checking xmapbridge-manual.tex using pdflatex ... OK
* Installing *source* package 'xmapbridge' ...
** R
** data
** inst
** preparing package for lazy loading
Creating a generic for "show" in package "xmapbridge"
(the supplied definition differs from and overrides the implicit generic in package "methods": Signatures differ: (object), (object))
** help
>>> Building/Updating help pages for package 'xmapbridge'
Formats: text html latex example
exon.data text html latex
xmap.col text html latex example
xmap.files text html latex example
xmap.plot text html latex example
xmapbridge-internal text html latex
xmapbridge-package text html latex
** building package indices ...
* DONE (xmapbridge)