minet 1.2.0 Patrick E. Meyer
Bioconductor Changelog | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/minet | Last Changed Rev: 34811 / Revision: 38965 | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/minet.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'minet/DESCRIPTION' ... OK
* this is package 'minet' version '1.2.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'minet' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating minet-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating minet-manual.tex ... OK
* checking minet-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/minet.Rcheck
---------- Making package minet ------------
adding build stamp to DESCRIPTION
making DLL ...
making aracne.d from aracne.cpp
making clr.d from clr.cpp
making disc.d from disc.cpp
making mim.d from mim.cpp
making minet.d from minet.cpp
making mrnet.d from mrnet.cpp
making symmetrize.d from symmetrize.cpp
making validate.d from validate.cpp
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c aracne.cpp -o aracne.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c clr.cpp -o clr.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c disc.cpp -o disc.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c mim.cpp -o mim.o
mim.cpp: In function 'double minformation(const double*, int, int, int, int, char)':
mim.cpp:101: warning: 'Hij' may be used uninitialized in this function
mim.cpp:101: warning: 'Hj' may be used uninitialized in this function
mim.cpp:101: warning: 'Hi' may be used uninitialized in this function
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c minet.cpp -o minet.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c mrnet.cpp -o mrnet.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c symmetrize.cpp -o symmetrize.o
g++ -Ie:/biocbld/bbs-2.3-bioc/R/include -O2 -Wall -c validate.cpp -o validate.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include -i minet_res.rc -o minet_res.o
g++ -shared -s -o minet.dll minet.def aracne.o clr.o disc.o mim.o minet.o mrnet.o symmetrize.o validate.o minet_res.o -Le:/biocbld/bbs-2.3-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing demos
installing inst files
installing data files
preparing package minet for lazy loading
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'minet'
Formats: text html latex example chm
aracne.net text html latex example chm
build.mim text html latex example chm
clr.net text html latex example chm
disc text html latex example chm
minet text html latex example chm
mr.net text html latex example chm
norm text html latex example chm
syn.data text html latex example chm
syn.net text html latex example chm
validate text html latex example chm
vis.res text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\minet.Rcheck\00_pkg_src\minet\chm\minet.chm
Compile time: 0 minutes, 0 seconds
12 Topics
61 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\minet.Rcheck\00_pkg_src\minet\chm\minet.chm, 31,572 bytes
Compression decreased file by 9,767 bytes.
adding MD5 sums
* DONE (minet)