* checking for file 'macat/DESCRIPTION' ... OK
* preparing 'macat':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/1.9d/tmpdir/Rinst605265374
---------- Making package macat ------------
adding build stamp to DESCRIPTION
installing R files
installing demos
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'macat'
Formats: text html latex example chm
buildMACAT text html latex example chm
compute.sliding text html latex example chm
discreteKernelize text html latex example chm
discretize text html latex chm
discretize.tscores text html latex example chm
discretizeAll text html latex example chm
evalScoring text html latex example chm
evaluateParameters text html latex example chm
get.results text html latex example chm
html text html latex chm
kernelize text html latex example chm
kernelizeAll text html latex example chm
kernelizeToPython text html latex example chm
kernels text html latex example chm
loaddatapkg text html latex example chm
macat-internal text html latex chm
plot.MACATevalScoring text html latex example chm
preprocessedLoader text html latex example chm
pythondata text html latex example chm
scoring text html latex example chm
stjd text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\1.9d\Rpacks\macat\chm\macat.chm
Compile time: 0 minutes, 0 seconds
22 Topics
85 Local links
0 Internet links
1 Graphic
Created d:\biocbld\1.9d\Rpacks\macat\chm\macat.chm, 44,369 bytes
Compression decreased file by 36,331 bytes.
preparing package macat for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
adding MD5 sums
* DONE (macat)
* creating vignettes ... ERROR
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Error: chunk 1
Error: Need Package 'reposTools' for automatic download. !
Please, try to obtain package 'stjudem' manually from
http://compdiag.molgen.mpg.de/software
install it and rerun this demo.
Error in buildVignettes(dir = ".") : Error: chunk 1
Error: Need Package 'reposTools' for automatic download. !
Please, try to obtain package 'stjudem' manually from
http://compdiag.molgen.mpg.de/software
install it and rerun this demo.
Execution halted