To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ggtut")

In most cases, you don't need to download the package archive at all.

ggtut

   

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see ggtut.

support for tutorial on genetics of gene expression ISMB 2011

Bioconductor version: 2.10

various resources for genetics of expression with R/bioc

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ggtut")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ggtut")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ggtut")

 

PDF careyGGtutslides.pdf
PDF extras.pdf
PDF tut11.pdf
PDF tut12.pdf
PDF   Reference Manual

Details

biocViews ExperimentData
Version 0.0.42
License Artistic-2.0
Depends R (>= 2.14.0), GGtools(>= 3.11.32), ff, GenomicRanges, snpStats, GGdata, GenomicFeatures, ChIPpeakAnno, Rsamtools(>= 1.5.35), cheung2010, SNPlocs.Hsapiens.dbSNP.20090506, hmyriB36
Imports
LinkingTo
Suggests rtracklayer, GenomicFeatures, ChIPpeakAnno, TxDb.Hsapiens.UCSC.hg18.knownGene
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ggtut_0.0.42.tar.gz
Windows Binary ggtut_0.0.42.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/ggtut/
Package Downloads Report Download Stats

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