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This page was generated on 2024-11-27 08:30 -0500 (Wed, 27 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4739
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 23/47HostnameOS / ArchINSTALLBUILDCHECK
excluderanges 0.99.8  (landing page)
Mikhail Dozmorov
Snapshot Date: 2024-11-27 06:00 -0500 (Wed, 27 Nov 2024)
git_url: https://git.bioconductor.org/packages/excluderanges
git_branch: RELEASE_3_20
git_last_commit: f53e82d
git_last_commit_date: 2022-11-28 07:01:27 -0500 (Mon, 28 Nov 2022)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for excluderanges on nebbiolo2

To the developers/maintainers of the excluderanges package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: excluderanges
Version: 0.99.8
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data excluderanges
StartedAt: 2024-11-27 06:31:25 -0500 (Wed, 27 Nov 2024)
EndedAt: 2024-11-27 06:32:13 -0500 (Wed, 27 Nov 2024)
EllapsedTime: 48.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data excluderanges
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* checking for file ‘excluderanges/DESCRIPTION’ ... OK
* preparing ‘excluderanges’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘excluderanges.Rmd’ using rmarkdown

Quitting from lines 402-421 [unnamed-chunk-9] (excluderanges.Rmd)
Error: processing vignette 'excluderanges.Rmd' failed with diagnostics:
cannnot determine start/end columns
--- failed re-building ‘excluderanges.Rmd’

SUMMARY: processing the following file failed:
  ‘excluderanges.Rmd’

Error: Vignette re-building failed.
Execution halted