Back to Books build report for BioC 3.20

This page was generated on 2024-12-09 14:30 -0500 (Mon, 09 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4739
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 5/10HostnameOS / ArchINSTALLBUILDCHECK
OSCA.advanced 1.14.0  (landing page)
Ludwig Geistlinger
Snapshot Date: 2024-12-09 06:00 -0500 (Mon, 09 Dec 2024)
git_url: https://git.bioconductor.org/packages/OSCA.advanced
git_branch: RELEASE_3_20
git_last_commit: 16871ae
git_last_commit_date: 2024-10-29 10:07:59 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  NO, package depends on 'OSCA.multisample' which is not available

BUILD results for OSCA.advanced on nebbiolo2

To the developers/maintainers of the OSCA.advanced package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OSCA.advanced
Version: 1.14.0
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.advanced
StartedAt: 2024-12-09 06:16:59 -0500 (Mon, 09 Dec 2024)
EndedAt: 2024-12-09 08:31:32 -0500 (Mon, 09 Dec 2024)
EllapsedTime: 8072.6 seconds
RetCode: 0
Status:   OK  
PackageFile: OSCA.advanced_1.14.0.tar.gz
PackageFileSize: 21.65 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.advanced
###
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* checking for file ‘OSCA.advanced/DESCRIPTION’ ... OK
* preparing ‘OSCA.advanced’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* creating default NAMESPACE file
* building ‘OSCA.advanced_1.14.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.advanced/inst/doc/book/droplet-processing_files/figure-html/mammary-swapped-barcode-rank-after-1.png’