Back to Rapid builds (Linux only) of a subset of BioC 3.21 Report updated every 6 hours |
This page was generated on 2024-12-04 09:55 -0500 (Wed, 04 Dec 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-11-14 r87333) -- "Unsuffered Consequences" | 861 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 63/216 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
DEXSeq 1.53.0 (landing page) Alejandro Reyes
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||
To the developers/maintainers of the DEXSeq package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: DEXSeq |
Version: 1.53.0 |
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data DEXSeq |
StartedAt: 2024-12-04 06:48:03 -0500 (Wed, 04 Dec 2024) |
EndedAt: 2024-12-04 06:49:07 -0500 (Wed, 04 Dec 2024) |
EllapsedTime: 63.6 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data DEXSeq ### ############################################################################## ############################################################################## * checking for file ‘DEXSeq/DESCRIPTION’ ... OK * preparing ‘DEXSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘DEXSeq.Rmd’ using rmarkdown trying URL 'https://ftp.ensembl.org/pub/release-62/gtf/drosophila_melanogaster/Drosophila_melanogaster.BDGP5.25.62.gtf.gz' Content type 'application/x-gzip' length 2739429 bytes (2.6 MB) ================================================== downloaded 2.6 MB Quitting from lines 150-151 [startVignette] (DEXSeq.Rmd) Error: processing vignette 'DEXSeq.Rmd' failed with diagnostics: there is no package called 'pasilla' --- failed re-building ‘DEXSeq.Rmd’ SUMMARY: processing the following file failed: ‘DEXSeq.Rmd’ Error: Vignette re-building failed. Execution halted