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This page was generated on 2024-10-18 20:40 -0400 (Fri, 18 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4763
palomino7Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4500
merida1macOS 12.7.5 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4530
kjohnson1macOS 13.6.6 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4480
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2295/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
zellkonverter 1.14.1  (landing page)
Luke Zappia
Snapshot Date: 2024-10-16 14:00 -0400 (Wed, 16 Oct 2024)
git_url: https://git.bioconductor.org/packages/zellkonverter
git_branch: RELEASE_3_19
git_last_commit: c90c58a
git_last_commit_date: 2024-06-21 04:52:52 -0400 (Fri, 21 Jun 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    NA  


BUILD results for zellkonverter on palomino7

To the developers/maintainers of the zellkonverter package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/zellkonverter.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: zellkonverter
Version: 1.14.1
Command: chmod a+r zellkonverter -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data zellkonverter
StartedAt: 2024-10-16 22:33:48 -0400 (Wed, 16 Oct 2024)
EndedAt: 2024-10-16 22:35:01 -0400 (Wed, 16 Oct 2024)
EllapsedTime: 73.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r zellkonverter -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data zellkonverter
###
##############################################################################
##############################################################################


* checking for file 'zellkonverter/DESCRIPTION' ... OK
* preparing 'zellkonverter':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'zellkonverter.Rmd' using rmarkdown

Quitting from lines 42-48 [read] (zellkonverter.Rmd)
Error: processing vignette 'zellkonverter.Rmd' failed with diagnostics:
ModuleNotFoundError: No module named 'anndata'
Run `reticulate::py_last_error()` for details.
--- failed re-building 'zellkonverter.Rmd'

SUMMARY: processing the following file failed:
  'zellkonverter.Rmd'

Error: Vignette re-building failed.
Execution halted