Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-09-24 22:55 -0400 (Tue, 24 Sep 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4760 |
palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4497 |
merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4526 |
kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4475 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 987/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.10.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.10.0 |
Command: E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=E:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings HPiP_1.10.0.tar.gz |
StartedAt: 2024-09-23 01:39:20 -0400 (Mon, 23 Sep 2024) |
EndedAt: 2024-09-23 01:44:16 -0400 (Mon, 23 Sep 2024) |
EllapsedTime: 296.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=E:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings HPiP_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'E:/biocbuild/bbs-3.19-bioc/meat/HPiP.Rcheck' * using R version 4.4.1 (2024-06-14 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * using option '--no-vignettes' * checking for file 'HPiP/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'HPiP' version '1.10.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'HPiP' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: 'ftrCOOL' * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in 'vignettes' ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed FSmethod 34.33 1.67 36.20 corr_plot 33.34 1.48 34.86 var_imp 32.26 1.17 33.59 pred_ensembel 15.12 0.61 11.35 enrichfindP 0.69 0.06 12.63 * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'runTests.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See 'E:/biocbuild/bbs-3.19-bioc/meat/HPiP.Rcheck/00check.log' for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.19-bioc/R/library' * installing *source* package 'HPiP' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 96.573924 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 96.917712 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 116.250105 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 99.446622 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.256815 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.586495 iter 10 value 91.106972 iter 20 value 90.322505 iter 30 value 89.930119 iter 40 value 89.927884 final value 89.927851 converged Fitting Repeat 2 # weights: 305 initial value 101.774612 iter 10 value 92.257263 final value 92.243290 converged Fitting Repeat 3 # weights: 305 initial value 96.033868 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 105.363912 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 112.639947 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 97.723478 final value 93.836066 converged Fitting Repeat 2 # weights: 507 initial value 111.918275 iter 10 value 92.033476 iter 20 value 92.029799 final value 92.029796 converged Fitting Repeat 3 # weights: 507 initial value 96.751288 final value 93.836066 converged Fitting Repeat 4 # weights: 507 initial value 125.621708 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 113.785403 iter 10 value 86.953381 iter 20 value 84.220256 iter 30 value 79.409167 iter 40 value 77.617218 iter 50 value 76.680969 iter 60 value 75.669995 iter 70 value 75.591695 iter 80 value 75.588357 iter 90 value 75.588084 iter 100 value 75.588018 final value 75.588018 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.785741 iter 10 value 93.908808 iter 20 value 93.081837 iter 30 value 87.530382 iter 40 value 83.580356 iter 50 value 83.403366 iter 60 value 82.791228 iter 70 value 82.454527 iter 80 value 82.313218 final value 82.308846 converged Fitting Repeat 2 # weights: 103 initial value 108.416928 iter 10 value 94.068062 iter 20 value 94.023844 iter 30 value 92.942749 iter 40 value 92.738818 iter 50 value 92.709899 iter 60 value 91.690658 iter 70 value 88.122200 iter 80 value 87.577820 iter 90 value 86.532122 iter 100 value 82.981652 final value 82.981652 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.656688 iter 10 value 94.028889 iter 20 value 92.719814 iter 30 value 92.536487 iter 40 value 90.553019 iter 50 value 84.088263 iter 60 value 83.085422 iter 70 value 82.453732 iter 80 value 82.360130 iter 90 value 82.323260 final value 82.303200 converged Fitting Repeat 4 # weights: 103 initial value 108.285907 iter 10 value 94.046296 iter 20 value 92.946320 iter 30 value 92.716041 iter 40 value 92.671315 iter 50 value 92.520143 iter 60 value 92.212821 iter 70 value 90.829926 iter 80 value 83.755204 iter 90 value 83.216056 iter 100 value 81.637073 final value 81.637073 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.121194 iter 10 value 94.142900 iter 20 value 94.032495 iter 30 value 92.677157 iter 40 value 92.393445 iter 50 value 91.612687 iter 60 value 90.949358 iter 70 value 87.592812 iter 80 value 85.553517 iter 90 value 85.405204 iter 100 value 84.954152 final value 84.954152 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 109.037226 iter 10 value 94.280929 iter 20 value 92.800347 iter 30 value 86.994260 iter 40 value 83.265174 iter 50 value 80.065947 iter 60 value 79.352676 iter 70 value 78.602365 iter 80 value 78.344404 iter 90 value 78.154117 iter 100 value 78.101281 final value 78.101281 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.868443 iter 10 value 94.680478 iter 20 value 92.796830 iter 30 value 91.826240 iter 40 value 86.850155 iter 50 value 83.000729 iter 60 value 82.315519 iter 70 value 82.086472 iter 80 value 82.014168 iter 90 value 81.973915 iter 100 value 81.753138 final value 81.753138 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 116.639957 iter 10 value 94.319560 iter 20 value 88.872371 iter 30 value 82.958490 iter 40 value 82.197613 iter 50 value 82.077538 iter 60 value 82.004344 iter 70 value 80.977716 iter 80 value 80.604495 iter 90 value 80.172717 iter 100 value 79.691360 final value 79.691360 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.719018 iter 10 value 93.853243 iter 20 value 93.042682 iter 30 value 92.904702 iter 40 value 90.603405 iter 50 value 82.536478 iter 60 value 80.388132 iter 70 value 78.507452 iter 80 value 77.647845 iter 90 value 77.402222 iter 100 value 77.335822 final value 77.335822 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.363170 iter 10 value 93.902483 iter 20 value 88.938782 iter 30 value 87.913726 iter 40 value 85.897430 iter 50 value 82.590994 iter 60 value 79.901477 iter 70 value 78.966736 iter 80 value 78.052787 iter 90 value 77.848973 iter 100 value 77.838696 final value 77.838696 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.247775 iter 10 value 94.170223 iter 20 value 93.769281 iter 30 value 92.811068 iter 40 value 87.090032 iter 50 value 83.682258 iter 60 value 80.290090 iter 70 value 79.457679 iter 80 value 78.869560 iter 90 value 78.176358 iter 100 value 78.101057 final value 78.101057 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 111.651368 iter 10 value 94.492761 iter 20 value 94.064775 iter 30 value 84.274128 iter 40 value 82.862895 iter 50 value 82.298183 iter 60 value 81.156212 iter 70 value 79.864178 iter 80 value 79.472091 iter 90 value 79.238642 iter 100 value 79.200444 final value 79.200444 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.019863 iter 10 value 94.046995 iter 20 value 92.756647 iter 30 value 89.961237 iter 40 value 84.119857 iter 50 value 82.562956 iter 60 value 80.211165 iter 70 value 78.663214 iter 80 value 78.185333 iter 90 value 78.141474 iter 100 value 77.709261 final value 77.709261 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 103.476226 iter 10 value 93.697216 iter 20 value 92.661548 iter 30 value 89.154810 iter 40 value 84.303867 iter 50 value 82.352572 iter 60 value 80.795503 iter 70 value 79.716205 iter 80 value 79.237453 iter 90 value 78.578785 iter 100 value 78.112370 final value 78.112370 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.431517 iter 10 value 93.915962 iter 20 value 90.209760 iter 30 value 86.680148 iter 40 value 85.946301 iter 50 value 85.242449 iter 60 value 82.369861 iter 70 value 82.083215 iter 80 value 81.821919 iter 90 value 80.798882 iter 100 value 78.519911 final value 78.519911 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.166928 final value 94.054366 converged Fitting Repeat 2 # weights: 103 initial value 94.099671 final value 94.054777 converged Fitting Repeat 3 # weights: 103 initial value 98.623750 final value 94.054412 converged Fitting Repeat 4 # weights: 103 initial value 103.016910 final value 94.054536 converged Fitting Repeat 5 # weights: 103 initial value 102.619838 iter 10 value 92.290422 iter 20 value 92.287677 iter 30 value 92.286534 iter 40 value 87.822141 iter 50 value 81.767190 iter 60 value 76.643659 iter 70 value 76.432853 iter 80 value 76.368835 iter 90 value 76.367418 final value 76.367366 converged Fitting Repeat 1 # weights: 305 initial value 110.063657 iter 10 value 94.057410 iter 20 value 94.053073 iter 30 value 92.605029 final value 92.524160 converged Fitting Repeat 2 # weights: 305 initial value 117.171894 iter 10 value 94.057987 iter 20 value 93.723346 iter 30 value 91.443847 iter 40 value 82.947377 iter 50 value 81.662996 iter 60 value 80.778960 iter 70 value 80.768063 iter 80 value 80.708414 iter 90 value 80.702331 final value 80.702311 converged Fitting Repeat 3 # weights: 305 initial value 105.616582 iter 10 value 93.841360 iter 20 value 93.593560 iter 30 value 92.374626 final value 92.243738 converged Fitting Repeat 4 # weights: 305 initial value 102.313301 iter 10 value 93.841430 iter 20 value 92.445313 iter 30 value 84.669830 iter 40 value 82.085908 iter 50 value 80.894491 iter 60 value 80.113447 iter 70 value 79.501088 iter 80 value 79.478001 iter 80 value 79.478001 iter 80 value 79.478001 final value 79.478001 converged Fitting Repeat 5 # weights: 305 initial value 100.081814 iter 10 value 93.815064 iter 20 value 93.614722 iter 30 value 90.183792 iter 40 value 90.176242 iter 50 value 90.147931 iter 60 value 90.068197 iter 70 value 83.282103 iter 80 value 82.216478 iter 90 value 82.150330 iter 100 value 82.132633 final value 82.132633 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 100.512415 iter 10 value 91.571118 iter 20 value 91.379517 iter 30 value 90.012469 iter 40 value 84.698989 iter 50 value 84.491060 iter 60 value 84.462553 iter 70 value 84.462305 iter 80 value 84.439624 iter 90 value 84.394727 iter 100 value 84.385975 final value 84.385975 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 101.702416 iter 10 value 89.905957 iter 20 value 82.062414 iter 30 value 82.004102 iter 40 value 81.989008 iter 40 value 81.989007 final value 81.989007 converged Fitting Repeat 3 # weights: 507 initial value 97.109815 iter 10 value 92.838749 iter 20 value 92.829484 iter 30 value 91.947511 iter 40 value 91.569124 iter 50 value 91.553777 iter 60 value 91.027272 iter 70 value 90.550698 iter 80 value 90.508933 iter 90 value 90.493088 iter 100 value 90.422966 final value 90.422966 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 94.571293 iter 10 value 94.057651 iter 20 value 92.983001 iter 30 value 92.014807 iter 40 value 86.018084 iter 50 value 81.098300 iter 60 value 80.354837 iter 70 value 79.108606 iter 80 value 77.498792 iter 90 value 77.498362 iter 100 value 76.656721 final value 76.656721 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 97.307029 iter 10 value 94.060167 iter 20 value 94.000473 iter 30 value 83.942002 iter 40 value 83.911862 iter 50 value 83.299709 iter 60 value 82.797004 iter 70 value 82.633777 final value 82.633382 converged Fitting Repeat 1 # weights: 103 initial value 96.863401 final value 94.144481 converged Fitting Repeat 2 # weights: 103 initial value 106.566849 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 101.783817 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.795691 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.621639 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 123.596050 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 104.068512 iter 10 value 94.326471 iter 10 value 94.326471 iter 10 value 94.326471 final value 94.326471 converged Fitting Repeat 3 # weights: 305 initial value 100.184766 final value 94.354396 converged Fitting Repeat 4 # weights: 305 initial value 102.507133 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 104.225849 iter 10 value 94.300419 iter 20 value 94.283438 iter 30 value 94.283334 iter 30 value 94.283334 iter 30 value 94.283334 final value 94.283334 converged Fitting Repeat 1 # weights: 507 initial value 111.953038 final value 94.088890 converged Fitting Repeat 2 # weights: 507 initial value 112.029179 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 110.342446 iter 10 value 94.326471 iter 10 value 94.326471 iter 10 value 94.326471 final value 94.326471 converged Fitting Repeat 4 # weights: 507 initial value 96.764877 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 110.200960 iter 10 value 93.665315 iter 20 value 93.621813 final value 93.621797 converged Fitting Repeat 1 # weights: 103 initial value 98.332824 iter 10 value 94.489249 iter 20 value 90.677630 iter 30 value 89.187494 iter 40 value 88.918048 iter 50 value 88.635489 iter 60 value 88.306604 iter 70 value 88.261972 final value 88.261876 converged Fitting Repeat 2 # weights: 103 initial value 100.235311 iter 10 value 94.256529 iter 20 value 89.407059 iter 30 value 88.529335 iter 40 value 87.733768 iter 50 value 87.398151 iter 60 value 87.050931 iter 70 value 86.299102 iter 80 value 86.274432 final value 86.274393 converged Fitting Repeat 3 # weights: 103 initial value 105.376713 iter 10 value 94.458763 iter 20 value 92.043306 iter 30 value 90.775516 iter 40 value 90.410192 iter 50 value 90.025021 iter 60 value 88.858407 iter 70 value 87.218935 iter 80 value 86.713298 iter 90 value 86.662391 iter 100 value 86.457066 final value 86.457066 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.905222 iter 10 value 94.492659 iter 20 value 94.441516 iter 30 value 92.360044 iter 40 value 91.345953 iter 50 value 89.737693 iter 60 value 89.227488 iter 70 value 89.120026 iter 80 value 88.601604 iter 90 value 88.412165 iter 100 value 88.267608 final value 88.267608 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.237956 iter 10 value 94.475352 iter 20 value 93.704482 iter 30 value 91.218071 iter 40 value 90.691645 iter 50 value 88.139844 iter 60 value 87.942973 iter 70 value 87.862399 iter 80 value 87.002628 iter 90 value 86.187812 iter 100 value 86.118288 final value 86.118288 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 105.656393 iter 10 value 94.481327 iter 20 value 91.686784 iter 30 value 89.441035 iter 40 value 88.302272 iter 50 value 88.104429 iter 60 value 87.653947 iter 70 value 87.520408 iter 80 value 87.478853 iter 90 value 87.326751 iter 100 value 86.416925 final value 86.416925 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 118.592083 iter 10 value 94.324558 iter 20 value 90.663684 iter 30 value 89.354692 iter 40 value 89.150631 iter 50 value 88.781369 iter 60 value 87.287330 iter 70 value 86.268407 iter 80 value 86.035208 iter 90 value 85.819254 iter 100 value 85.792881 final value 85.792881 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.655303 iter 10 value 95.181196 iter 20 value 94.733021 iter 30 value 93.556883 iter 40 value 93.092379 iter 50 value 92.324127 iter 60 value 91.558191 iter 70 value 89.787600 iter 80 value 88.431371 iter 90 value 87.789624 iter 100 value 87.464440 final value 87.464440 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 113.650610 iter 10 value 94.567127 iter 20 value 93.819049 iter 30 value 88.838758 iter 40 value 88.597053 iter 50 value 88.089929 iter 60 value 86.466782 iter 70 value 86.014530 iter 80 value 85.704406 iter 90 value 85.554877 iter 100 value 85.552543 final value 85.552543 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.083924 iter 10 value 94.454802 iter 20 value 94.175964 iter 30 value 90.757226 iter 40 value 88.705706 iter 50 value 87.115168 iter 60 value 86.529133 iter 70 value 86.105902 iter 80 value 85.329121 iter 90 value 85.294256 iter 100 value 85.219602 final value 85.219602 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 111.850174 iter 10 value 94.353699 iter 20 value 91.795615 iter 30 value 90.006731 iter 40 value 87.648215 iter 50 value 86.985609 iter 60 value 85.909328 iter 70 value 85.547214 iter 80 value 85.313557 iter 90 value 85.242131 iter 100 value 85.051904 final value 85.051904 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 103.737587 iter 10 value 92.323272 iter 20 value 89.222300 iter 30 value 88.212092 iter 40 value 87.341318 iter 50 value 86.721922 iter 60 value 86.519183 iter 70 value 86.062753 iter 80 value 86.030418 iter 90 value 85.627220 iter 100 value 85.279967 final value 85.279967 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 119.367704 iter 10 value 94.430928 iter 20 value 88.994385 iter 30 value 88.778232 iter 40 value 88.723342 iter 50 value 88.196473 iter 60 value 87.672378 iter 70 value 87.280830 iter 80 value 86.059769 iter 90 value 85.459124 iter 100 value 85.351832 final value 85.351832 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.081088 iter 10 value 94.348541 iter 20 value 93.624254 iter 30 value 88.564466 iter 40 value 88.072498 iter 50 value 87.754277 iter 60 value 87.489946 iter 70 value 87.170412 iter 80 value 86.392698 iter 90 value 85.551668 iter 100 value 85.372062 final value 85.372062 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.912513 iter 10 value 94.716467 iter 20 value 89.083236 iter 30 value 88.053906 iter 40 value 87.130352 iter 50 value 85.618995 iter 60 value 85.268547 iter 70 value 84.860487 iter 80 value 84.627912 iter 90 value 84.495798 iter 100 value 84.442811 final value 84.442811 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.523823 final value 94.146159 converged Fitting Repeat 2 # weights: 103 initial value 100.870182 final value 94.485712 converged Fitting Repeat 3 # weights: 103 initial value 96.304765 final value 94.485930 converged Fitting Repeat 4 # weights: 103 initial value 94.629225 final value 94.485843 converged Fitting Repeat 5 # weights: 103 initial value 104.403263 final value 94.454789 converged Fitting Repeat 1 # weights: 305 initial value 101.461445 iter 10 value 94.486800 final value 94.484870 converged Fitting Repeat 2 # weights: 305 initial value 99.103608 iter 10 value 94.489167 iter 20 value 94.475188 iter 30 value 93.408600 iter 40 value 90.989074 iter 50 value 88.873264 iter 60 value 88.513992 iter 70 value 88.197913 final value 88.197123 converged Fitting Repeat 3 # weights: 305 initial value 104.566606 iter 10 value 94.359157 iter 20 value 94.322126 iter 30 value 91.616453 iter 40 value 88.052510 iter 50 value 87.700643 iter 60 value 86.800043 final value 86.798844 converged Fitting Repeat 4 # weights: 305 initial value 104.972883 iter 10 value 94.359543 iter 20 value 94.355601 final value 94.354926 converged Fitting Repeat 5 # weights: 305 initial value 95.066206 iter 10 value 93.796780 iter 20 value 88.467495 iter 30 value 88.275548 iter 40 value 87.903952 iter 50 value 87.899541 iter 60 value 87.760009 iter 70 value 87.055379 iter 80 value 87.051971 final value 87.051919 converged Fitting Repeat 1 # weights: 507 initial value 101.249559 iter 10 value 94.491963 iter 20 value 94.484079 iter 30 value 90.627162 iter 40 value 90.610892 iter 50 value 88.919213 iter 60 value 88.917770 iter 70 value 88.917120 iter 80 value 88.917033 iter 90 value 88.513671 iter 100 value 88.352607 final value 88.352607 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.126657 iter 10 value 94.396359 iter 20 value 94.389992 iter 30 value 93.933457 iter 40 value 89.154949 iter 50 value 88.709602 iter 60 value 88.707978 iter 70 value 88.381985 iter 80 value 87.825565 iter 90 value 87.819590 iter 100 value 87.818564 final value 87.818564 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.603494 iter 10 value 94.152458 iter 20 value 93.998713 iter 30 value 89.809050 iter 40 value 89.519189 iter 50 value 86.784778 iter 60 value 85.503921 iter 70 value 85.051138 iter 80 value 84.862459 final value 84.827641 converged Fitting Repeat 4 # weights: 507 initial value 111.474662 iter 10 value 94.494087 iter 20 value 94.466535 iter 30 value 89.319406 iter 40 value 88.653990 iter 50 value 88.233111 iter 60 value 88.229192 final value 88.229105 converged Fitting Repeat 5 # weights: 507 initial value 96.327497 iter 10 value 94.490873 iter 20 value 94.350738 iter 30 value 92.116251 iter 40 value 90.240178 iter 50 value 90.236306 iter 60 value 90.236134 iter 70 value 90.235848 iter 80 value 90.235623 iter 90 value 90.235339 iter 100 value 90.088527 final value 90.088527 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.140294 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 103.657018 iter 10 value 94.112907 final value 94.112903 converged Fitting Repeat 3 # weights: 103 initial value 114.193918 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.253713 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 94.856624 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 103.753948 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 96.306197 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 107.509824 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.438470 final value 94.448052 converged Fitting Repeat 5 # weights: 305 initial value 99.032120 final value 94.427726 converged Fitting Repeat 1 # weights: 507 initial value 94.903768 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 102.175816 final value 94.478286 converged Fitting Repeat 3 # weights: 507 initial value 97.687298 iter 10 value 85.092890 iter 20 value 84.745702 iter 30 value 84.650065 iter 40 value 84.649952 final value 84.649951 converged Fitting Repeat 4 # weights: 507 initial value 96.431465 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 120.372687 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 98.252842 iter 10 value 94.488687 iter 20 value 91.275749 iter 30 value 88.900981 iter 40 value 86.140383 iter 50 value 85.698931 iter 60 value 84.807172 iter 70 value 84.201613 iter 80 value 83.789825 iter 90 value 83.725670 final value 83.725640 converged Fitting Repeat 2 # weights: 103 initial value 107.636376 iter 10 value 93.396780 iter 20 value 87.070906 iter 30 value 86.303396 iter 40 value 85.013332 iter 50 value 84.690616 iter 60 value 84.236378 iter 70 value 83.997428 iter 80 value 83.949402 iter 90 value 83.947580 final value 83.947554 converged Fitting Repeat 3 # weights: 103 initial value 103.863254 iter 10 value 94.478260 iter 20 value 94.319090 iter 30 value 94.316922 iter 40 value 93.038370 iter 50 value 86.936325 iter 60 value 86.518503 iter 70 value 85.584298 iter 80 value 84.451135 iter 90 value 84.161361 iter 100 value 84.117689 final value 84.117689 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.873400 iter 10 value 94.500545 iter 20 value 94.289074 iter 30 value 90.368268 iter 40 value 87.516396 iter 50 value 84.864792 iter 60 value 83.856673 iter 70 value 83.763536 iter 80 value 83.725442 final value 83.724939 converged Fitting Repeat 5 # weights: 103 initial value 106.888218 iter 10 value 94.288582 iter 20 value 94.190244 iter 30 value 86.390525 iter 40 value 85.158509 iter 50 value 84.874597 iter 60 value 84.588625 iter 70 value 84.064685 iter 80 value 83.955675 iter 90 value 83.947634 final value 83.947554 converged Fitting Repeat 1 # weights: 305 initial value 100.956293 iter 10 value 94.492241 iter 20 value 91.544401 iter 30 value 89.416903 iter 40 value 86.306760 iter 50 value 85.545456 iter 60 value 83.556955 iter 70 value 82.856444 iter 80 value 81.547451 iter 90 value 81.306959 iter 100 value 81.284043 final value 81.284043 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.647805 iter 10 value 90.826023 iter 20 value 87.443432 iter 30 value 86.089317 iter 40 value 85.819944 iter 50 value 85.749283 iter 60 value 85.467991 iter 70 value 83.835645 iter 80 value 81.900346 iter 90 value 81.380812 iter 100 value 81.340783 final value 81.340783 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 120.870468 iter 10 value 94.690221 iter 20 value 94.219044 iter 30 value 91.156364 iter 40 value 85.509901 iter 50 value 84.585574 iter 60 value 84.333394 iter 70 value 82.514843 iter 80 value 81.843363 iter 90 value 81.399990 iter 100 value 80.898185 final value 80.898185 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.805893 iter 10 value 91.990139 iter 20 value 88.577347 iter 30 value 88.062532 iter 40 value 84.303337 iter 50 value 82.691046 iter 60 value 82.535990 iter 70 value 82.430640 iter 80 value 81.759591 iter 90 value 81.188778 iter 100 value 80.851014 final value 80.851014 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.633189 iter 10 value 100.133633 iter 20 value 94.589973 iter 30 value 94.281083 iter 40 value 89.479986 iter 50 value 88.283912 iter 60 value 86.462598 iter 70 value 86.149603 iter 80 value 85.450929 iter 90 value 84.726719 iter 100 value 82.409757 final value 82.409757 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.092276 iter 10 value 94.534821 iter 20 value 94.488940 iter 30 value 88.910679 iter 40 value 84.635988 iter 50 value 84.391407 iter 60 value 84.043956 iter 70 value 83.518926 iter 80 value 82.321892 iter 90 value 81.590761 iter 100 value 81.231769 final value 81.231769 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 112.964485 iter 10 value 94.445241 iter 20 value 87.295852 iter 30 value 86.376903 iter 40 value 86.091461 iter 50 value 85.301377 iter 60 value 83.525805 iter 70 value 83.086290 iter 80 value 82.869333 iter 90 value 82.388224 iter 100 value 82.232524 final value 82.232524 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.989371 iter 10 value 94.443703 iter 20 value 89.490627 iter 30 value 88.186841 iter 40 value 85.135636 iter 50 value 83.891670 iter 60 value 83.783970 iter 70 value 83.570386 iter 80 value 83.444306 iter 90 value 83.059985 iter 100 value 82.604866 final value 82.604866 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 116.177160 iter 10 value 94.862889 iter 20 value 93.185347 iter 30 value 86.117466 iter 40 value 82.648940 iter 50 value 81.448525 iter 60 value 81.168480 iter 70 value 81.026207 iter 80 value 80.614765 iter 90 value 79.835634 iter 100 value 79.613994 final value 79.613994 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 114.387787 iter 10 value 94.792066 iter 20 value 94.215112 iter 30 value 86.263382 iter 40 value 84.813887 iter 50 value 84.396634 iter 60 value 84.164444 iter 70 value 83.796674 iter 80 value 82.079075 iter 90 value 81.132633 iter 100 value 80.565902 final value 80.565902 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.212004 final value 94.485947 converged Fitting Repeat 2 # weights: 103 initial value 94.895562 final value 94.486189 converged Fitting Repeat 3 # weights: 103 initial value 95.256309 final value 94.485913 converged Fitting Repeat 4 # weights: 103 initial value 97.109770 iter 10 value 94.114936 iter 20 value 94.114420 iter 30 value 94.113369 final value 94.113336 converged Fitting Repeat 5 # weights: 103 initial value 99.821984 final value 94.485960 converged Fitting Repeat 1 # weights: 305 initial value 96.523885 iter 10 value 93.877242 iter 20 value 93.838543 iter 30 value 93.837603 iter 40 value 93.833266 iter 50 value 93.832776 iter 60 value 93.758236 iter 70 value 92.139240 iter 80 value 85.068758 iter 90 value 82.769923 iter 100 value 79.838672 final value 79.838672 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 122.477726 iter 10 value 94.488935 iter 20 value 94.484491 iter 30 value 94.411426 iter 40 value 93.206545 iter 50 value 88.717450 iter 60 value 86.852850 iter 70 value 86.850709 iter 70 value 86.850708 iter 70 value 86.850708 final value 86.850708 converged Fitting Repeat 3 # weights: 305 initial value 98.532420 iter 10 value 94.488461 iter 20 value 93.887075 iter 30 value 86.076352 iter 40 value 85.845915 iter 50 value 85.808229 iter 60 value 85.654427 iter 70 value 85.644024 iter 80 value 83.390391 final value 83.390379 converged Fitting Repeat 4 # weights: 305 initial value 106.092649 iter 10 value 94.452842 iter 20 value 94.448722 iter 30 value 94.266495 iter 40 value 94.264941 final value 94.264939 converged Fitting Repeat 5 # weights: 305 initial value 108.587661 iter 10 value 94.489315 iter 20 value 94.397653 iter 30 value 92.334451 iter 40 value 91.991499 iter 50 value 91.910033 final value 91.909614 converged Fitting Repeat 1 # weights: 507 initial value 112.476199 iter 10 value 94.274506 iter 20 value 94.267026 iter 30 value 94.072689 iter 40 value 94.068258 iter 50 value 94.066872 final value 94.066769 converged Fitting Repeat 2 # weights: 507 initial value 106.833563 iter 10 value 94.492039 iter 20 value 88.056777 iter 30 value 86.629372 iter 40 value 86.628523 iter 50 value 85.262815 iter 60 value 83.821096 iter 70 value 83.237656 iter 80 value 83.213475 iter 90 value 83.212651 iter 100 value 83.212353 final value 83.212353 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.317818 iter 10 value 94.491799 iter 20 value 94.476437 iter 30 value 86.706854 iter 40 value 85.744700 iter 50 value 85.434327 iter 60 value 85.410328 iter 70 value 85.385934 iter 80 value 83.776959 iter 90 value 83.635901 iter 100 value 83.618900 final value 83.618900 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 116.458578 iter 10 value 94.492904 iter 20 value 94.305464 iter 30 value 86.125607 iter 40 value 85.755940 iter 50 value 85.610969 iter 60 value 85.176093 iter 70 value 85.056658 iter 80 value 85.055695 final value 85.055600 converged Fitting Repeat 5 # weights: 507 initial value 94.562424 iter 10 value 85.514633 iter 20 value 83.018195 iter 30 value 82.751337 iter 40 value 82.749766 iter 50 value 81.582981 iter 60 value 80.557369 iter 70 value 80.106208 iter 80 value 80.095822 iter 90 value 79.850613 iter 100 value 79.689780 final value 79.689780 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.134171 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 101.860177 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 95.331728 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 107.853780 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 111.349853 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.903592 final value 94.466823 converged Fitting Repeat 2 # weights: 305 initial value 94.783215 final value 94.461538 converged Fitting Repeat 3 # weights: 305 initial value 113.269968 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 96.524748 final value 94.483334 converged Fitting Repeat 5 # weights: 305 initial value 108.685829 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 105.244478 iter 10 value 94.467027 iter 20 value 94.466825 iter 20 value 94.466824 iter 20 value 94.466824 final value 94.466824 converged Fitting Repeat 2 # weights: 507 initial value 97.124246 final value 94.427726 converged Fitting Repeat 3 # weights: 507 initial value 98.500833 iter 10 value 93.963334 iter 20 value 92.061894 iter 30 value 91.345657 iter 40 value 90.309887 iter 50 value 90.227548 iter 60 value 90.215934 iter 70 value 90.215604 final value 90.215602 converged Fitting Repeat 4 # weights: 507 initial value 114.302622 iter 10 value 88.107443 iter 20 value 87.464043 final value 87.464042 converged Fitting Repeat 5 # weights: 507 initial value 102.973546 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 96.849435 iter 10 value 94.112776 iter 20 value 90.939970 iter 30 value 90.046830 iter 40 value 84.756220 iter 50 value 83.933270 iter 60 value 83.051880 iter 70 value 80.625907 iter 80 value 79.942021 iter 90 value 79.856817 final value 79.856105 converged Fitting Repeat 2 # weights: 103 initial value 104.647445 iter 10 value 94.367280 iter 20 value 87.080658 iter 30 value 84.212438 iter 40 value 82.507853 iter 50 value 82.343153 iter 60 value 82.184198 iter 70 value 82.129856 final value 82.129666 converged Fitting Repeat 3 # weights: 103 initial value 97.389663 iter 10 value 94.428475 iter 20 value 88.485692 iter 30 value 88.074667 iter 40 value 85.806900 iter 50 value 85.214287 iter 60 value 84.948577 iter 70 value 83.298319 iter 80 value 80.619367 iter 90 value 79.353227 iter 100 value 79.263663 final value 79.263663 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.795889 iter 10 value 94.491071 iter 20 value 93.198711 iter 30 value 87.490704 iter 40 value 87.119085 iter 50 value 82.852641 iter 60 value 82.363686 iter 70 value 82.341243 iter 80 value 82.135678 final value 82.129666 converged Fitting Repeat 5 # weights: 103 initial value 111.861288 iter 10 value 94.485648 iter 20 value 87.500071 iter 30 value 85.840257 iter 40 value 85.192672 iter 50 value 84.130393 iter 60 value 83.974439 iter 70 value 80.372220 iter 80 value 79.900208 iter 90 value 79.877016 iter 100 value 79.858376 final value 79.858376 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.900378 iter 10 value 94.512832 iter 20 value 94.469457 iter 30 value 86.175138 iter 40 value 84.876297 iter 50 value 83.565373 iter 60 value 81.416903 iter 70 value 79.947659 iter 80 value 79.793150 iter 90 value 79.559506 iter 100 value 79.459230 final value 79.459230 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.623729 iter 10 value 94.709355 iter 20 value 91.984074 iter 30 value 90.730968 iter 40 value 90.527972 iter 50 value 87.780295 iter 60 value 82.454187 iter 70 value 81.713623 iter 80 value 79.628102 iter 90 value 78.623258 iter 100 value 78.163595 final value 78.163595 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.387437 iter 10 value 94.268109 iter 20 value 86.568374 iter 30 value 84.093252 iter 40 value 83.421589 iter 50 value 80.977594 iter 60 value 79.558537 iter 70 value 79.536416 iter 80 value 79.532677 iter 90 value 79.531385 iter 100 value 79.527618 final value 79.527618 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.933223 iter 10 value 94.580960 iter 20 value 91.193393 iter 30 value 86.865927 iter 40 value 85.598310 iter 50 value 83.257885 iter 60 value 81.957286 iter 70 value 81.766887 iter 80 value 81.725299 iter 90 value 81.553168 iter 100 value 80.220117 final value 80.220117 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.086772 iter 10 value 94.533010 iter 20 value 93.278215 iter 30 value 88.211183 iter 40 value 82.328688 iter 50 value 81.332697 iter 60 value 80.462038 iter 70 value 79.585129 iter 80 value 79.415674 iter 90 value 79.268697 iter 100 value 79.164115 final value 79.164115 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.182996 iter 10 value 94.614622 iter 20 value 94.492584 iter 30 value 93.223394 iter 40 value 84.209619 iter 50 value 83.606411 iter 60 value 81.254798 iter 70 value 80.213153 iter 80 value 79.826586 iter 90 value 79.388229 iter 100 value 79.112864 final value 79.112864 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 127.450901 iter 10 value 95.054748 iter 20 value 87.455785 iter 30 value 84.628602 iter 40 value 80.641274 iter 50 value 79.595272 iter 60 value 79.261099 iter 70 value 78.660918 iter 80 value 78.526981 iter 90 value 78.488974 iter 100 value 78.277815 final value 78.277815 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 121.844468 iter 10 value 94.389879 iter 20 value 88.668543 iter 30 value 82.664400 iter 40 value 80.645845 iter 50 value 79.762390 iter 60 value 79.598892 iter 70 value 79.397619 iter 80 value 79.270346 iter 90 value 79.093990 iter 100 value 78.831086 final value 78.831086 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 116.577163 iter 10 value 94.557197 iter 20 value 93.501372 iter 30 value 84.830546 iter 40 value 83.601579 iter 50 value 82.577487 iter 60 value 80.946649 iter 70 value 79.106317 iter 80 value 78.742240 iter 90 value 78.571625 iter 100 value 78.494181 final value 78.494181 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.721613 iter 10 value 93.437300 iter 20 value 85.160889 iter 30 value 81.677816 iter 40 value 80.887644 iter 50 value 80.606808 iter 60 value 80.449098 iter 70 value 80.310885 iter 80 value 79.825930 iter 90 value 78.778089 iter 100 value 78.613913 final value 78.613913 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.909085 final value 94.485869 converged Fitting Repeat 2 # weights: 103 initial value 101.096777 final value 94.486016 converged Fitting Repeat 3 # weights: 103 initial value 97.443407 final value 94.485748 converged Fitting Repeat 4 # weights: 103 initial value 96.498651 iter 10 value 94.485606 iter 20 value 90.845375 iter 30 value 89.864890 iter 40 value 89.092800 iter 50 value 89.092043 iter 60 value 89.087494 iter 70 value 88.998749 iter 80 value 88.998431 iter 90 value 88.998317 final value 88.998310 converged Fitting Repeat 5 # weights: 103 initial value 113.612781 iter 10 value 94.485859 iter 20 value 94.456498 iter 30 value 88.980732 iter 40 value 88.894514 iter 50 value 88.890631 iter 60 value 88.884147 iter 70 value 88.883815 iter 80 value 88.883726 iter 90 value 88.883638 final value 88.883539 converged Fitting Repeat 1 # weights: 305 initial value 106.443528 iter 10 value 94.454095 iter 20 value 94.419247 final value 94.254256 converged Fitting Repeat 2 # weights: 305 initial value 100.849838 iter 10 value 94.471634 iter 20 value 94.369521 iter 30 value 94.167342 iter 40 value 94.165964 iter 50 value 94.165860 final value 94.165826 converged Fitting Repeat 3 # weights: 305 initial value 124.656321 iter 10 value 94.473306 iter 20 value 94.415075 iter 30 value 94.410111 iter 40 value 94.258748 final value 94.253911 converged Fitting Repeat 4 # weights: 305 initial value 101.945892 iter 10 value 94.488673 iter 20 value 94.021461 iter 30 value 85.128704 iter 40 value 85.104682 final value 85.104662 converged Fitting Repeat 5 # weights: 305 initial value 106.973695 iter 10 value 94.489261 iter 20 value 94.480117 iter 30 value 93.894467 iter 40 value 92.843896 iter 50 value 92.843592 iter 60 value 91.648239 iter 70 value 91.639523 iter 80 value 91.639395 final value 91.639297 converged Fitting Repeat 1 # weights: 507 initial value 97.812984 iter 10 value 94.492091 iter 20 value 89.760831 iter 30 value 80.191629 iter 40 value 80.157601 iter 50 value 80.157277 iter 60 value 79.710086 iter 70 value 78.854105 iter 80 value 78.706063 iter 90 value 78.666469 iter 100 value 78.663260 final value 78.663260 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.057027 iter 10 value 94.492403 iter 20 value 93.447935 iter 30 value 87.818547 iter 40 value 87.792819 iter 50 value 87.545293 iter 60 value 87.535075 iter 70 value 87.527390 iter 80 value 87.105200 iter 90 value 85.004366 iter 100 value 84.975149 final value 84.975149 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.047785 iter 10 value 94.492257 iter 20 value 94.484179 iter 30 value 94.387334 iter 40 value 91.803764 iter 50 value 91.637322 final value 91.637228 converged Fitting Repeat 4 # weights: 507 initial value 101.265026 iter 10 value 94.414148 iter 20 value 94.408107 iter 30 value 85.002211 iter 40 value 83.213427 iter 50 value 83.137874 iter 60 value 82.827107 iter 70 value 82.352159 iter 80 value 82.249939 iter 90 value 81.671000 iter 100 value 81.659652 final value 81.659652 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 95.611449 iter 10 value 88.696126 iter 20 value 86.571091 iter 30 value 86.551464 iter 40 value 86.384065 iter 50 value 86.168541 iter 60 value 86.118516 iter 70 value 86.109932 iter 80 value 85.584534 iter 90 value 85.532836 iter 100 value 85.529617 final value 85.529617 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.520898 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 115.437463 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 94.115175 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 95.332462 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.888023 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 104.422910 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 98.810375 iter 10 value 93.969040 iter 10 value 93.969040 iter 10 value 93.969040 final value 93.969040 converged Fitting Repeat 3 # weights: 305 initial value 94.373191 iter 10 value 85.435132 iter 20 value 80.823829 iter 30 value 80.822275 iter 40 value 80.819218 iter 50 value 80.704696 final value 80.669264 converged Fitting Repeat 4 # weights: 305 initial value 99.863198 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 97.913276 iter 10 value 91.815948 iter 20 value 90.790709 iter 30 value 90.783409 final value 90.782946 converged Fitting Repeat 1 # weights: 507 initial value 118.082271 final value 93.288889 converged Fitting Repeat 2 # weights: 507 initial value 98.552202 final value 94.032967 converged Fitting Repeat 3 # weights: 507 initial value 98.046168 final value 93.967787 converged Fitting Repeat 4 # weights: 507 initial value 96.703635 final value 94.032967 converged Fitting Repeat 5 # weights: 507 initial value 106.697361 iter 10 value 87.239587 iter 20 value 84.193867 iter 30 value 84.124042 final value 84.123737 converged Fitting Repeat 1 # weights: 103 initial value 96.439531 iter 10 value 94.071551 iter 20 value 94.012903 iter 30 value 93.560755 iter 40 value 91.295001 iter 50 value 88.398991 iter 60 value 84.547704 iter 70 value 83.006600 iter 80 value 82.974878 iter 90 value 82.970797 final value 82.970582 converged Fitting Repeat 2 # weights: 103 initial value 99.770732 iter 10 value 91.948440 iter 20 value 83.025086 iter 30 value 82.008600 iter 40 value 81.717643 iter 50 value 81.485014 iter 60 value 81.449059 iter 70 value 81.431516 final value 81.431497 converged Fitting Repeat 3 # weights: 103 initial value 99.416395 iter 10 value 94.023998 iter 20 value 92.914832 iter 30 value 89.346154 iter 40 value 87.662107 iter 50 value 86.956765 iter 60 value 82.176120 iter 70 value 81.910416 iter 80 value 81.870762 iter 90 value 81.823993 iter 100 value 81.803040 final value 81.803040 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.209866 iter 10 value 94.063735 iter 20 value 87.268576 iter 30 value 86.099154 iter 40 value 85.464922 iter 50 value 83.180542 iter 60 value 82.658649 iter 70 value 81.683205 iter 80 value 79.646670 iter 90 value 79.213524 final value 79.208389 converged Fitting Repeat 5 # weights: 103 initial value 98.270072 iter 10 value 93.874969 iter 20 value 90.857478 iter 30 value 85.065957 iter 40 value 83.664201 iter 50 value 81.563158 iter 60 value 81.057224 iter 70 value 80.963543 final value 80.962730 converged Fitting Repeat 1 # weights: 305 initial value 100.701596 iter 10 value 93.966555 iter 20 value 90.311424 iter 30 value 84.365704 iter 40 value 81.485135 iter 50 value 80.901325 iter 60 value 80.246218 iter 70 value 79.740860 iter 80 value 78.845654 iter 90 value 78.273904 iter 100 value 78.206651 final value 78.206651 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.920634 iter 10 value 89.023243 iter 20 value 83.585743 iter 30 value 82.028971 iter 40 value 81.571742 iter 50 value 81.193120 iter 60 value 80.191528 iter 70 value 79.762976 iter 80 value 79.618396 iter 90 value 79.443744 iter 100 value 79.411962 final value 79.411962 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.736580 iter 10 value 93.789327 iter 20 value 86.877075 iter 30 value 83.932325 iter 40 value 82.354198 iter 50 value 80.524122 iter 60 value 79.938738 iter 70 value 79.768204 iter 80 value 79.491874 iter 90 value 79.229359 iter 100 value 79.218113 final value 79.218113 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.262309 iter 10 value 94.055385 iter 20 value 82.681569 iter 30 value 82.065961 iter 40 value 81.981427 iter 50 value 81.850248 iter 60 value 81.602518 iter 70 value 79.870662 iter 80 value 79.021680 iter 90 value 78.431979 iter 100 value 78.269375 final value 78.269375 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.018212 iter 10 value 94.061052 iter 20 value 94.049396 iter 30 value 81.774721 iter 40 value 79.745995 iter 50 value 79.156944 iter 60 value 78.701689 iter 70 value 78.567015 iter 80 value 78.474673 iter 90 value 78.138782 iter 100 value 77.817561 final value 77.817561 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 111.531139 iter 10 value 87.072972 iter 20 value 82.985682 iter 30 value 82.230547 iter 40 value 81.726177 iter 50 value 81.583038 iter 60 value 80.733648 iter 70 value 79.795336 iter 80 value 78.900351 iter 90 value 78.202745 iter 100 value 77.620198 final value 77.620198 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 135.241316 iter 10 value 94.137725 iter 20 value 93.402930 iter 30 value 87.848080 iter 40 value 82.090058 iter 50 value 80.501184 iter 60 value 79.030182 iter 70 value 78.573375 iter 80 value 78.413009 iter 90 value 78.065349 iter 100 value 77.647158 final value 77.647158 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.395301 iter 10 value 93.981345 iter 20 value 92.051326 iter 30 value 86.654225 iter 40 value 83.329837 iter 50 value 81.040359 iter 60 value 79.243245 iter 70 value 78.344075 iter 80 value 77.908723 iter 90 value 77.872496 iter 100 value 77.834368 final value 77.834368 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 114.375029 iter 10 value 93.571121 iter 20 value 84.213995 iter 30 value 80.836690 iter 40 value 79.606695 iter 50 value 78.116060 iter 60 value 77.613379 iter 70 value 77.500866 iter 80 value 77.259036 iter 90 value 77.178120 iter 100 value 77.143776 final value 77.143776 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 112.952290 iter 10 value 94.034527 iter 20 value 93.391489 iter 30 value 92.458522 iter 40 value 82.100932 iter 50 value 79.752961 iter 60 value 79.285310 iter 70 value 78.325932 iter 80 value 77.979588 iter 90 value 77.900085 iter 100 value 77.717980 final value 77.717980 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.925215 final value 94.054337 converged Fitting Repeat 2 # weights: 103 initial value 102.308921 final value 94.054575 converged Fitting Repeat 3 # weights: 103 initial value 94.834827 final value 94.054649 converged Fitting Repeat 4 # weights: 103 initial value 98.876381 final value 94.054625 converged Fitting Repeat 5 # weights: 103 initial value 95.593056 iter 10 value 85.607695 iter 20 value 85.606440 final value 85.605031 converged Fitting Repeat 1 # weights: 305 initial value 100.932439 iter 10 value 94.057033 final value 94.053261 converged Fitting Repeat 2 # weights: 305 initial value 98.617198 iter 10 value 94.057072 iter 20 value 89.381428 iter 30 value 85.110534 iter 40 value 84.979269 iter 50 value 83.639801 iter 60 value 83.628112 iter 70 value 83.627707 iter 80 value 80.376209 iter 90 value 80.101307 iter 100 value 80.091622 final value 80.091622 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.678922 iter 10 value 93.821683 iter 20 value 88.926096 iter 30 value 87.626982 iter 40 value 82.659111 iter 50 value 82.448218 iter 60 value 81.802354 final value 81.769486 converged Fitting Repeat 4 # weights: 305 initial value 96.554189 iter 10 value 93.198884 iter 20 value 92.827111 iter 30 value 92.823291 iter 40 value 91.912737 iter 40 value 91.912737 iter 50 value 79.717819 iter 60 value 79.244218 final value 79.235883 converged Fitting Repeat 5 # weights: 305 initial value 107.938653 iter 10 value 94.058558 iter 20 value 93.725251 iter 30 value 91.584350 iter 40 value 90.399410 iter 50 value 90.342460 iter 60 value 90.342109 final value 90.342050 converged Fitting Repeat 1 # weights: 507 initial value 106.271888 iter 10 value 93.999797 iter 20 value 93.925075 iter 30 value 89.436272 iter 40 value 89.286542 iter 50 value 89.267225 iter 60 value 89.223164 final value 89.223144 converged Fitting Repeat 2 # weights: 507 initial value 109.439765 iter 10 value 94.059795 iter 20 value 94.043231 iter 30 value 93.295040 iter 40 value 92.771334 iter 50 value 90.747867 final value 90.747722 converged Fitting Repeat 3 # weights: 507 initial value 95.523115 iter 10 value 94.061146 iter 20 value 87.031419 iter 30 value 82.596386 iter 40 value 82.002989 iter 50 value 81.009762 iter 60 value 81.004170 iter 70 value 80.998725 final value 80.998179 converged Fitting Repeat 4 # weights: 507 initial value 104.122814 iter 10 value 85.183229 iter 20 value 81.514273 iter 30 value 81.302407 iter 40 value 80.943783 iter 50 value 80.939045 iter 60 value 80.909687 iter 70 value 80.897660 iter 80 value 80.896100 final value 80.895119 converged Fitting Repeat 5 # weights: 507 initial value 102.461160 iter 10 value 94.041262 iter 20 value 93.596077 iter 30 value 84.107400 iter 40 value 83.649889 iter 50 value 83.618891 iter 60 value 83.616491 iter 70 value 83.609818 iter 80 value 82.079402 iter 90 value 77.946573 iter 100 value 77.319174 final value 77.319174 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 137.274677 iter 10 value 117.766912 iter 20 value 117.759418 iter 30 value 117.232197 iter 40 value 104.469587 iter 50 value 104.287270 iter 60 value 104.278981 iter 70 value 103.952004 iter 80 value 103.770910 iter 90 value 103.711606 final value 103.710634 converged Fitting Repeat 2 # weights: 507 initial value 125.207208 iter 10 value 117.899359 iter 20 value 117.890939 iter 30 value 117.885119 iter 40 value 117.759049 iter 40 value 117.759048 iter 40 value 117.759048 final value 117.759048 converged Fitting Repeat 3 # weights: 507 initial value 134.175492 iter 10 value 117.615806 iter 20 value 117.577089 iter 30 value 117.513453 iter 40 value 117.512625 iter 50 value 117.511799 iter 50 value 117.511799 final value 117.511799 converged Fitting Repeat 4 # weights: 507 initial value 119.048407 iter 10 value 117.766109 iter 20 value 117.726913 iter 30 value 117.201608 iter 40 value 109.307450 iter 50 value 107.054590 iter 60 value 106.910895 iter 70 value 106.899735 iter 80 value 106.545458 iter 90 value 102.958938 iter 100 value 100.798420 final value 100.798420 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 126.928445 iter 10 value 117.547200 iter 20 value 117.545299 iter 30 value 117.538360 final value 117.538080 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Mon Sep 23 01:44:05 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 47.01 2.12 51.50
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 34.33 | 1.67 | 36.20 | |
FreqInteractors | 0.23 | 0.03 | 0.28 | |
calculateAAC | 0.04 | 0.00 | 0.04 | |
calculateAutocor | 0.44 | 0.07 | 0.50 | |
calculateCTDC | 0.08 | 0.00 | 0.08 | |
calculateCTDD | 0.75 | 0.01 | 0.77 | |
calculateCTDT | 0.34 | 0.02 | 0.36 | |
calculateCTriad | 0.48 | 0.01 | 0.50 | |
calculateDC | 0.16 | 0.00 | 0.16 | |
calculateF | 0.44 | 0.04 | 0.47 | |
calculateKSAAP | 0.09 | 0.00 | 0.09 | |
calculateQD_Sm | 2.47 | 0.21 | 2.69 | |
calculateTC | 1.97 | 0.08 | 2.05 | |
calculateTC_Sm | 0.39 | 0.02 | 0.40 | |
corr_plot | 33.34 | 1.48 | 34.86 | |
enrichfindP | 0.69 | 0.06 | 12.63 | |
enrichfind_hp | 0.08 | 0.02 | 1.01 | |
enrichplot | 0.34 | 0.02 | 0.36 | |
filter_missing_values | 0 | 0 | 0 | |
getFASTA | 0.02 | 0.00 | 2.28 | |
getHPI | 0 | 0 | 0 | |
get_negativePPI | 0 | 0 | 0 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0 | 0 | 0 | |
plotPPI | 0.08 | 0.00 | 0.08 | |
pred_ensembel | 15.12 | 0.61 | 11.35 | |
var_imp | 32.26 | 1.17 | 33.59 | |