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This page was generated on 2024-11-28 15:01 -0500 (Thu, 28 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
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Package 413/429HostnameOS / ArchINSTALLBUILDCHECK
TumourMethData 1.5.0  (landing page)
Richard Heery
Snapshot Date: 2024-11-28 07:30 -0500 (Thu, 28 Nov 2024)
git_url: https://git.bioconductor.org/packages/TumourMethData
git_branch: devel
git_last_commit: ce6e6e5
git_last_commit_date: 2024-10-29 09:55:01 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for TumourMethData on nebbiolo1

To the developers/maintainers of the TumourMethData package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: TumourMethData
Version: 1.5.0
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TumourMethData
StartedAt: 2024-11-28 11:40:09 -0500 (Thu, 28 Nov 2024)
EndedAt: 2024-11-28 11:40:26 -0500 (Thu, 28 Nov 2024)
EllapsedTime: 16.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TumourMethData
###
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* checking for file ‘TumourMethData/DESCRIPTION’ ... OK
* preparing ‘TumourMethData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘TumourMethData’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘HDF5Array::h5ls’ by ‘rhdf5::h5ls’ when loading ‘TumourMethData’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘HDF5Array::h5ls’ by ‘rhdf5::h5ls’ when loading ‘TumourMethData’
Error: package or namespace load failed for ‘TumourMethData’ in namespaceExport(ns, exports):
 undefined exports: download_rnaseq_dataset
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/tmp/RtmpLlJM63/Rinst393f8c65973765/TumourMethData’
      -----------------------------------
ERROR: package installation failed