Back to Build/check report for BioC 3.21 experimental data
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-11-28 15:01 -0500 (Thu, 28 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 150/429HostnameOS / ArchINSTALLBUILDCHECK
GeuvadisTranscriptExpr 1.35.0  (landing page)
Malgorzata Nowicka
Snapshot Date: 2024-11-28 07:30 -0500 (Thu, 28 Nov 2024)
git_url: https://git.bioconductor.org/packages/GeuvadisTranscriptExpr
git_branch: devel
git_last_commit: 04f54b8
git_last_commit_date: 2024-10-29 09:45:11 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for GeuvadisTranscriptExpr on nebbiolo1

To the developers/maintainers of the GeuvadisTranscriptExpr package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GeuvadisTranscriptExpr
Version: 1.35.0
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeuvadisTranscriptExpr
StartedAt: 2024-11-28 11:17:21 -0500 (Thu, 28 Nov 2024)
EndedAt: 2024-11-28 11:17:53 -0500 (Thu, 28 Nov 2024)
EllapsedTime: 31.5 seconds
RetCode: 0
Status:   OK  
PackageFile: GeuvadisTranscriptExpr_1.35.0.tar.gz
PackageFileSize: 7.202 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeuvadisTranscriptExpr
###
##############################################################################
##############################################################################


* checking for file ‘GeuvadisTranscriptExpr/DESCRIPTION’ ... OK
* preparing ‘GeuvadisTranscriptExpr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘GeuvadisTranscriptExpr/data/gene_ranges.rda’
    ‘GeuvadisTranscriptExpr/data/snp_ranges.rda’
* building ‘GeuvadisTranscriptExpr_1.35.0.tar.gz’