Rapid builds (Linux only) of a subset of BioC 3.21<BR>Report updated every 6 hours

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	870
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BUILD results for supraHex on teran2

To the developers/maintainers of the supraHex package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: supraHex

Version: 1.45.1

Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data supraHex

StartedAt: 2025-03-24 12:29:04 -0400 (Mon, 24 Mar 2025)

EndedAt: 2025-03-24 12:29:06 -0400 (Mon, 24 Mar 2025)

EllapsedTime: 1.3 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data supraHex
###
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* checking for file ‘supraHex/DESCRIPTION’ ... OK
* preparing ‘supraHex’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘supraHex’ ...
** this is package ‘supraHex’ version ‘1.45.1’
** using staged installation
** R
** data
** inst
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/CITATIONs.md', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/INSTALLATIONs.md', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/INSTALLATIONs_pre.md', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/README.md', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/README_previous.md', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/.Rapp.history', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/Fang.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/Golub.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/Hiratani.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/ISMB2014.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/List_demos.txt', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/PyClone.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/RNAseq.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/Sardar.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/demo/Xiang.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/docs.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/faq/FAQ1.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/faq/FAQ2.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/faq/FAQ3.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/faq/FAQ4.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
  cannot create file '/tmp/RtmpwBWGmV/Rinst22d6f82c7a0bf8/00LOCK-supraHex/00new/supraHex/staticdocs/faq/FAQ5.r', reason 'No such file or directory'
Warning in file.create(to[okay]) :
 
      -----------------------------------
ERROR: package installation failed