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This page was generated on 2025-03-01 15:34 -0500 (Sat, 01 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 87/217HostnameOS / ArchINSTALLBUILDCHECK
flowWorkspace 4.19.0  (landing page)
Greg Finak , Mike Jiang
Snapshot Date: 2025-03-01 12:00 -0500 (Sat, 01 Mar 2025)
git_url: https://git.bioconductor.org/packages/flowWorkspace
git_branch: devel
git_last_commit: 586e9e6
git_last_commit_date: 2024-10-29 09:37:06 -0500 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for flowWorkspace on teran2

To the developers/maintainers of the flowWorkspace package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: flowWorkspace
Version: 4.19.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data flowWorkspace
StartedAt: 2025-03-01 12:49:21 -0500 (Sat, 01 Mar 2025)
EndedAt: 2025-03-01 12:51:20 -0500 (Sat, 01 Mar 2025)
EllapsedTime: 119.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data flowWorkspace
###
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* checking for file ‘flowWorkspace/DESCRIPTION’ ... OK
* preparing ‘flowWorkspace’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘HowToMergeGatingSet.Rmd’ using rmarkdown

Quitting from lines 99-101 [unnamed-chunk-3] (HowToMergeGatingSet.Rmd)
Error: processing vignette 'HowToMergeGatingSet.Rmd' failed with diagnostics:
no slot of name "name" for this object of class "pEdge"
--- failed re-building ‘HowToMergeGatingSet.Rmd’

--- re-building ‘flowWorkspace-Introduction.Rmd’ using rmarkdown

Quitting from lines 58-59 [plotTree] (flowWorkspace-Introduction.Rmd)
Error: processing vignette 'flowWorkspace-Introduction.Rmd' failed with diagnostics:
no slot of name "name" for this object of class "pEdge"
--- failed re-building ‘flowWorkspace-Introduction.Rmd’

SUMMARY: processing the following files failed:
  ‘HowToMergeGatingSet.Rmd’ ‘flowWorkspace-Introduction.Rmd’

Error: Vignette re-building failed.
Execution halted