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This page was generated on 2025-03-26 00:43 -0400 (Wed, 26 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 870
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Package 95/217HostnameOS / ArchINSTALLBUILDCHECK
GenomicAlignments 1.43.0  (landing page)
Hervé Pagès
Snapshot Date: 2025-03-26 00:00 -0400 (Wed, 26 Mar 2025)
git_url: https://git.bioconductor.org/packages/GenomicAlignments
git_branch: devel
git_last_commit: db308fe
git_last_commit_date: 2024-10-29 09:49:20 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for GenomicAlignments on teran2

To the developers/maintainers of the GenomicAlignments package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GenomicAlignments
Version: 1.43.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicAlignments
StartedAt: 2025-03-26 00:26:02 -0400 (Wed, 26 Mar 2025)
EndedAt: 2025-03-26 00:26:03 -0400 (Wed, 26 Mar 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicAlignments
###
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* checking for file ‘GenomicAlignments/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/IRanges_stubs.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/R_init_GenomicAlignments.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/S4Vectors_stubs.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/cigar_utils.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/coordinate_mapping_methods.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/encodeOverlaps_methods.o': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/src/GenomicAlignments.so': No space left on device
cp: cannot create directory '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/tests': No space left on device
cp: cannot create directory '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/vignettes': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/NAMESPACE': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/NEWS': No space left on device
cp: error writing '/tmp/RtmpJpIzJO/Rbuild368419c34cc80/GenomicAlignments/README.md': No space left on device
 ERROR
copying to build directory failed