Back to Mac ARM64 build report for BioC 3.20 |
|
This page was generated on 2024-05-20 11:32:09 -0400 (Mon, 20 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4381 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 288/2233 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
CellaRepertorium 1.15.0 (landing page) Andrew McDavid
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | ||||||||
To the developers/maintainers of the CellaRepertorium package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: CellaRepertorium |
Version: 1.15.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CellaRepertorium |
StartedAt: 2024-05-18 14:49:59 -0400 (Sat, 18 May 2024) |
EndedAt: 2024-05-18 14:51:37 -0400 (Sat, 18 May 2024) |
EllapsedTime: 97.6 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CellaRepertorium ### ############################################################################## ############################################################################## * checking for file ‘CellaRepertorium/DESCRIPTION’ ... OK * preparing ‘CellaRepertorium’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to process help pages * creating vignettes ... ERROR --- re-building ‘cdr3_clustering.Rmd’ using rmarkdown 2024-05-18 14:50:48.880 R[95544:60372314] XType: Using static font registry. Quitting from lines at lines 202-208 [unnamed-chunk-17] (cdr3_clustering.Rmd) Error: processing vignette 'cdr3_clustering.Rmd' failed with diagnostics: ℹ In index: 1. ℹ With name: TRA. Caused by error in `.make_numeric_version()`: ! invalid non-character version specification 'x' (type: double) --- failed re-building ‘cdr3_clustering.Rmd’ --- re-building ‘cr-overview.Rmd’ using rmarkdown --- finished re-building ‘cr-overview.Rmd’ --- re-building ‘mouse_tcell_qc.Rmd’ using rmarkdown --- finished re-building ‘mouse_tcell_qc.Rmd’ --- re-building ‘repertoire_and_expression.Rmd’ using rmarkdown --- finished re-building ‘repertoire_and_expression.Rmd’ SUMMARY: processing the following file failed: ‘cdr3_clustering.Rmd’ Error: Vignette re-building failed. Execution halted