Back to Long Tests report for BioC 3.20 |
This page was generated on 2024-06-08 23:55 -0400 (Sat, 08 Jun 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4672 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4407 |
merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4434 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 31/32 | Hostname | OS / Arch | CHECK | |||||||
xcms 4.3.1 (landing page) Steffen Neumann
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | ERROR | |||||||
palomino4 | Windows Server 2022 Datacenter / x64 | ERROR | ||||||||
merida1 | macOS 12.7.4 Monterey / x86_64 | ERROR | ||||||||
To the developers/maintainers of the xcms package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: xcms |
Version: 4.3.1 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no xcms_4.3.1.tar.gz |
StartedAt: 2024-06-08 16:25:32 -0400 (Sat, 08 Jun 2024) |
EndedAt: 2024-06-08 16:25:38 -0400 (Sat, 08 Jun 2024) |
EllapsedTime: 5.6 seconds |
RetCode: 1 |
Status: ERROR |
CheckDir: xcms.Rcheck |
Warnings: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no xcms_4.3.1.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.20-bioc-longtests/meat/xcms.Rcheck’ * using R version 4.4.0 Patched (2024-04-24 r86482) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.4 * using session charset: UTF-8 * using options ‘--no-codoc --no-examples --no-manual --ignore-vignettes --no-stop-on-test-error’ * checking for file ‘xcms/DESCRIPTION’ ... OK * this is package ‘xcms’ version ‘4.3.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... ERROR Package suggested but not available: ‘faahKO’ The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable _R_CHECK_FORCE_SUGGESTS_ to a false value. See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. * DONE Status: 1 ERROR See ‘/Users/biocbuild/bbs-3.20-bioc-longtests/meat/xcms.Rcheck/00check.log’ for details.