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This page was generated on 2025-01-23 11:43 -0500 (Thu, 23 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 4435
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" 4374
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 3605
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 3835
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4407
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1706/2286HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReducedExperiment 0.99.6  (landing page)
Jack Gisby
Snapshot Date: 2025-01-22 13:40 -0500 (Wed, 22 Jan 2025)
git_url: https://git.bioconductor.org/packages/ReducedExperiment
git_branch: devel
git_last_commit: d7ad3c7
git_last_commit_date: 2025-01-15 09:52:58 -0500 (Wed, 15 Jan 2025)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    WARNINGS  

BUILD results for ReducedExperiment on kjohnson3

To the developers/maintainers of the ReducedExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReducedExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: ReducedExperiment
Version: 0.99.6
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReducedExperiment
StartedAt: 2025-01-22 16:56:42 -0500 (Wed, 22 Jan 2025)
EndedAt: 2025-01-22 16:57:05 -0500 (Wed, 22 Jan 2025)
EllapsedTime: 22.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReducedExperiment
###
##############################################################################
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* checking for file ‘ReducedExperiment/DESCRIPTION’ ... OK
* preparing ‘ReducedExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ReducedExperiment.Rmd’ using rmarkdown

Quitting from lines 306-313 [assess-threshold] (ReducedExperiment.Rmd)
Error: processing vignette 'ReducedExperiment.Rmd' failed with diagnostics:
there is no package called 'impute'
--- failed re-building ‘ReducedExperiment.Rmd’

SUMMARY: processing the following file failed:
  ‘ReducedExperiment.Rmd’

Error: Vignette re-building failed.
Execution halted