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This page was generated on 2024-11-28 12:16 -0500 (Thu, 28 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4459
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4398
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1509/2272HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PDATK 1.15.0  (landing page)
Benjamin Haibe-Kains
Snapshot Date: 2024-11-27 13:40 -0500 (Wed, 27 Nov 2024)
git_url: https://git.bioconductor.org/packages/PDATK
git_branch: devel
git_last_commit: 6c52f5f
git_last_commit_date: 2024-10-29 10:56:10 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  YES
palomino7Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  YES
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  YES


BUILD BIN results for PDATK on palomino7

To the developers/maintainers of the PDATK package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PDATK.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: PDATK
Version: 1.15.0
Command: rm -rf PDATK.buildbin-libdir && mkdir PDATK.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=PDATK.buildbin-libdir PDATK_1.15.0.tar.gz
StartedAt: 2024-11-28 07:27:58 -0500 (Thu, 28 Nov 2024)
EndedAt: 2024-11-28 07:30:29 -0500 (Thu, 28 Nov 2024)
EllapsedTime: 150.8 seconds
RetCode: 0
Status:   OK  
PackageFile: PDATK_1.15.0.zip
PackageFileSize: 2.556 MiB

Command output

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### Running command:
###
###   rm -rf PDATK.buildbin-libdir && mkdir PDATK.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=PDATK.buildbin-libdir PDATK_1.15.0.tar.gz
###
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* installing *source* package 'PDATK' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK'
Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK'
Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK'
Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu'
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'PDATK' as PDATK_1.15.0.zip
* DONE (PDATK)