| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-03-22 11:42 -0400 (Sat, 22 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences" | 4777 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" | 4547 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4576 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4528 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4458 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1428/2313 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| NeuCA 1.13.0 (landing page) Hao Feng
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the NeuCA package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/NeuCA.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: NeuCA |
| Version: 1.13.0 |
| Command: chmod a+r NeuCA -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data NeuCA |
| StartedAt: 2025-03-21 20:35:16 -0400 (Fri, 21 Mar 2025) |
| EndedAt: 2025-03-21 20:36:14 -0400 (Fri, 21 Mar 2025) |
| EllapsedTime: 57.8 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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###
### Running command:
###
### chmod a+r NeuCA -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data NeuCA
###
##############################################################################
##############################################################################
* checking for file 'NeuCA/DESCRIPTION' ... OK
* preparing 'NeuCA':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'NeuCA.Rmd' using rmarkdown
Quitting from NeuCA.Rmd:75-80 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Valid installation of TensorFlow not found.
Python environments searched for 'tensorflow' package:
C:\Users\biocbuild\AppData\Local\R\cache\R\reticulate\uv\cache\archive-v0\nujrHWtr3ipgXbS7SiEvQ\Scripts\python.exe
Python exception encountered:
Traceback (most recent call last):
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook
return _run_hook(name, _hook)
^^^^^^^^^^^^^^^^^^^^^^
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 96, in _run_hook
module = hook()
^^^^^^
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 120, in _hook
return _find_and_load(name, import_)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'tensorflow'
You can install TensorFlow using the install_tensorflow() function.
---
Backtrace:
▆
1. ├─NeuCA::NeuCA(...)
2. │ └─NeuCA:::BigNN(...)
3. │ └─... %>% ...
4. ├─generics::compile(...)
5. ├─keras::layer_dense(., units = nClass, activation = last_act)
6. │ ├─keras::create_layer(...)
7. │ ├─keras$layers
8. │ └─reticulate:::`$.python.builtin.module`(keras, "layers")
9. │ └─reticulate::py_get_attr(x, name, TRUE)
10. └─reticulate (local) `<fn>`(`<python.builtin.module>`)
11. └─keras (local) on_error(result)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'NeuCA.Rmd' failed with diagnostics:
Valid installation of TensorFlow not found.
Python environments searched for 'tensorflow' package:
C:\Users\biocbuild\AppData\Local\R\cache\R\reticulate\uv\cache\archive-v0\nujrHWtr3ipgXbS7SiEvQ\Scripts\python.exe
Python exception encountered:
Traceback (most recent call last):
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook
return _run_hook(name, _hook)
^^^^^^^^^^^^^^^^^^^^^^
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 96, in _run_hook
module = hook()
^^^^^^
File "E:\biocbuild\bbs-3.21-bioc\R\library\reticulate\python\rpytools\loader.py", line 120, in _hook
return _find_and_load(name, import_)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'tensorflow'
You can install TensorFlow using the install_tensorflow() function.
--- failed re-building 'NeuCA.Rmd'
SUMMARY: processing the following file failed:
'NeuCA.Rmd'
Error: Vignette re-building failed.
Execution halted