| Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-10-18 11:43 -0400 (Fri, 18 Oct 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4474 |
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4733 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4479 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4509 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4457 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 81/2273 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| AnVIL 1.17.17 (landing page) Marcel Ramos
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the AnVIL package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnVIL.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: AnVIL |
| Version: 1.17.17 |
| Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 AnVIL |
| StartedAt: 2024-10-17 16:08:56 -0400 (Thu, 17 Oct 2024) |
| EndedAt: 2024-10-17 16:09:03 -0400 (Thu, 17 Oct 2024) |
| EllapsedTime: 7.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 AnVIL ### ############################################################################## ############################################################################## * checking for file ‘AnVIL/DESCRIPTION’ ... OK * preparing ‘AnVIL’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘BiocDockstore.Rmd’ using rmarkdown Quitting from lines 20-26 [unnamed-chunk-1] (BiocDockstore.Rmd) Error: processing vignette 'BiocDockstore.Rmd' failed with diagnostics: 'has_avworkspace()' not implemented for class gcp --- failed re-building ‘BiocDockstore.Rmd’ --- re-building ‘Introduction.Rmd’ using rmarkdown Quitting from lines 33-40 [unnamed-chunk-1] (Introduction.Rmd) Error: processing vignette 'Introduction.Rmd' failed with diagnostics: 'has_avworkspace()' not implemented for class gcp Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found --- failed re-building ‘Introduction.Rmd’ --- re-building ‘RunningWorkflow.Rmd’ using rmarkdown Quitting from lines 28-35 [unnamed-chunk-1] (RunningWorkflow.Rmd) Error: processing vignette 'RunningWorkflow.Rmd' failed with diagnostics: 'has_avworkspace()' not implemented for class gcp Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found Error in eval(x, envir = envir) : object 'has_gcloud' not found --- failed re-building ‘RunningWorkflow.Rmd’ SUMMARY: processing the following files failed: ‘BiocDockstore.Rmd’ ‘Introduction.Rmd’ ‘RunningWorkflow.Rmd’ Error: Vignette re-building failed. Execution halted