Alexey Sergushichev
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/phantasus |
| Branch: master |
| Last Commit: d5d3a2a |
| Last Changed Date: 2019-02-02 08:32:57 -0400 (Sat, 02 Feb 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:37:20 -0400 (Tue, 09 Apr 2019).
| Package 1177/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| phantasus 1.3.4 Alexey Sergushichev
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: phantasus |
| Version: 1.3.4 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/phantasus_1.3.4.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.3.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL phantasus_1.3.4.zip && rm phantasus_1.3.4.tar.gz phantasus_1.3.4.zip |
| StartedAt: 2019-04-08 20:48:56 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 20:50:38 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 101.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/phantasus_1.3.4.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.3.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL phantasus_1.3.4.zip && rm phantasus_1.3.4.tar.gz phantasus_1.3.4.zip
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install for i386
* installing *source* package 'phantasus' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Loading config from C:/Users/biocbuild/bbs-3.9-bioc/R/library/opencpu/config/defaults.conf
Loading config from C:\Users\biocbuild\AppData\Local\opencpu\opencpu/user.conf
Warning: replacing previous import 'AnnotationDbi::head' by 'utils::head' when loading 'phantasus'
** help
*** installing help indices
converting help for package 'phantasus'
finding HTML links ... done
adjustDataset html
annotationDBMeta html
calcPCA html
calculatedAnnotation html
checkGPLs html
checkPreloadedNames html
collapseDataset html
convertByAnnotationDB html
createES html
es html
getArchs4Files html
getES html
getGDS html
getGSE html
gseaPlot html
limmaAnalysis html
loadFromARCHS4 html
loadGEO html
loadPreloaded html
performKmeans html
preloadedDirExists html
queryAnnotationDBMeta html
read.gct html
reparseCachedESs html
servePhantasus html
shinyGAMAnalysis html
subsetES html
write.gct html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Loading config from C:/Users/biocbuild/bbs-3.9-bioc/R/library/opencpu/config/defaults.conf
Loading config from C:\Users\biocbuild\AppData\Local\opencpu\opencpu/user.conf
Warning: replacing previous import 'AnnotationDbi::head' by 'utils::head' when loading 'phantasus'
** testing if installed package can be loaded from final location
Loading config from C:/Users/biocbuild/bbs-3.9-bioc/R/library/opencpu/config/defaults.conf
Loading config from C:\Users\biocbuild\AppData\Local\opencpu\opencpu/user.conf
Warning: replacing previous import 'AnnotationDbi::head' by 'utils::head' when loading 'phantasus'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'phantasus' ...
** testing if installed package can be loaded
Loading config from C:/Users/biocbuild/bbs-3.9-bioc/R/library/opencpu/config/defaults.conf
Loading config from C:\Users\biocbuild\AppData\Local\opencpu\opencpu/user.conf
Warning: replacing previous import 'AnnotationDbi::head' by 'utils::head' when loading 'phantasus'
* MD5 sums
packaged installation of 'phantasus' as phantasus_1.3.4.zip
* DONE (phantasus)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'phantasus' successfully unpacked and MD5 sums checked