Package: customProDB

Version: 1.23.1

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/customProDB_1.23.1.tar.gz && rm -rf customProDB.buildbin-libdir && mkdir customProDB.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=customProDB.buildbin-libdir customProDB_1.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL customProDB_1.23.1.zip && rm customProDB_1.23.1.tar.gz customProDB_1.23.1.zip

StartedAt: 2019-04-08 20:14:36 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:16:08 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 92.2 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/customProDB_1.23.1.tar.gz && rm -rf customProDB.buildbin-libdir && mkdir customProDB.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=customProDB.buildbin-libdir customProDB_1.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL customProDB_1.23.1.zip && rm customProDB_1.23.1.tar.gz customProDB_1.23.1.zip
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install for i386

* installing *source* package 'customProDB' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'customProDB'
    finding HTML links ... done
    Bed2Range                               html  
    InputVcf                                html  
    JunctionType                            html  
    Multiple_VCF                            html  
    OutputNovelJun                          html  
    OutputVarprocodingseq                   html  
    OutputVarproseq                         html  
    OutputVarproseq_single                  html  
    Outputaberrant                          html  
    Outputproseq                            html  
    OutputsharedPro                         html  
    Positionincoding                        html  
    PrepareAnnotationEnsembl                html  
    PrepareAnnotationRefseq                 html  
    SharedJunc                              html  
    Varlocation                             html  
    aaVariation                             html  
    calculateRPKM                           html  
    easyRun                                 html  
    easyRun_mul                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'customProDB' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'customProDB' as customProDB_1.23.1.zip
* DONE (customProDB)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'customProDB' successfully unpacked and MD5 sums checked