Package: XBSeq

Version: 1.15.1

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/XBSeq_1.15.1.tar.gz && rm -rf XBSeq.buildbin-libdir && mkdir XBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XBSeq.buildbin-libdir XBSeq_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL XBSeq_1.15.1.zip && rm XBSeq_1.15.1.tar.gz XBSeq_1.15.1.zip

StartedAt: 2019-04-08 20:18:58 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:20:11 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 72.3 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/XBSeq_1.15.1.tar.gz && rm -rf XBSeq.buildbin-libdir && mkdir XBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XBSeq.buildbin-libdir XBSeq_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL XBSeq_1.15.1.zip && rm XBSeq_1.15.1.tar.gz XBSeq_1.15.1.zip
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install for i386

* installing *source* package 'XBSeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'XBSeq'
    finding HTML links ... done
    ExampleData                             html  
    MAplot                                  html  
    XBSeq-package                           html  
    XBSeq                                   html  
    XBSeqDataSet-class                      html  
    finding level-2 HTML links ... done

    XBSeqTest                               html  
    XBplot                                  html  
    apaUsage                                html  
    conditions                              html  
    counts                                  html  
    dispEst                                 html  
    dispTable                               html  
    estimateRealCount                       html  
    estimateSCV                             html  
    fitInfo                                 html  
    getSignalVars                           html  
    plotSCVEsts                             html  
** building package indices
** installing vignettes
   'XBSeq.Rmd' using 'UTF-8' 
Warning in res[i] <- withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),  :
  number of items to replace is not a multiple of replacement length
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'XBSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'XBSeq' as XBSeq_1.15.1.zip
* DONE (XBSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'XBSeq' successfully unpacked and MD5 sums checked