Back to Multiple platform build/check report for BioC 3.8
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

BUILD BIN report for copa on tokay1

This page was generated on 2019-04-13 11:19:52 -0400 (Sat, 13 Apr 2019).

Package 325/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
copa 1.50.0
James W. MacDonald
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/copa
Branch: RELEASE_3_8
Last Commit: 070f7ae
Last Changed Date: 2018-10-30 11:41:43 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: copa
Version: 1.50.0
Command: rm -rf copa.buildbin-libdir && mkdir copa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copa.buildbin-libdir copa_1.50.0.tar.gz
StartedAt: 2019-04-13 07:07:02 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:07:20 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 18.3 seconds
RetCode: 0
Status:  OK  
PackageFile: copa_1.50.0.zip
PackageFileSize: 199.8 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf copa.buildbin-libdir && mkdir copa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copa.buildbin-libdir copa_1.50.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'copa' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c copa.c -o copa.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o copa.dll tmp.def copa.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/copa.buildbin-libdir/copa/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'copa'
    finding HTML links ... done
    copa                                    html  
    copa.package                            html  
    copaFilter                              html  
    copaPerm                                html  
    copaTable                               html  
    getans                                  html  
    pSum                                    html  
    perm.mat                                html  
    plotCopa                                html  
    scatterPlotCopa                         html  
    summaryCopa                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'copa' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c copa.c -o copa.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o copa.dll tmp.def copa.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/copa.buildbin-libdir/copa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'copa' as copa_1.50.0.zip
* DONE (copa)
In R CMD INSTALL
In R CMD INSTALL