BioC experimental data: CHECK report for MethylAidData on malbec1
This page was generated on 2017-08-15 15:11:35 -0400 (Tue, 15 Aug 2017).
MethylAidData 1.9.0 M. van Iterson
Snapshot Date: 2017-08-15 09:00:08 -0400 (Tue, 15 Aug 2017) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/MethylAidData | Last Changed Rev: 4157 / Revision: 4227 | Last Changed Date: 2017-04-24 16:19:55 -0400 (Mon, 24 Apr 2017) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | [ OK ] | |  |
Summary
Package: MethylAidData |
Version: 1.9.0 |
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings MethylAidData_1.9.0.tar.gz |
StartedAt: 2017-08-15 10:55:04 -0400 (Tue, 15 Aug 2017) |
EndedAt: 2017-08-15 10:56:41 -0400 (Tue, 15 Aug 2017) |
EllapsedTime: 97.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: MethylAidData.Rcheck |
Warnings: 0 |
Command output
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings MethylAidData_1.9.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.6-data-experiment/meat/MethylAidData.Rcheck’
* using R version 3.4.1 (2017-06-30)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MethylAidData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MethylAidData’ version ‘1.9.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MethylAidData’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 11.6Mb
sub-directories of 1Mb or more:
data 11.5Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
exampleDataLarge 6.108 0.12 6.237
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.6-data-experiment/meat/MethylAidData.Rcheck/00check.log’
for details.
MethylAidData.Rcheck/00install.out:
* installing *source* package ‘MethylAidData’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (MethylAidData)
MethylAidData.Rcheck/MethylAidData-Ex.timings:
name | user | system | elapsed
|
exampleDataLarge | 6.108 | 0.120 | 6.237 |
|