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INSTALL report for ontoProc on tokay1

This page was generated on 2018-04-12 13:30:46 -0400 (Thu, 12 Apr 2018).

Package 975/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ontoProc 1.0.0
VJ Carey
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/ontoProc
Branch: RELEASE_3_6
Last Commit: 39e8622
Last Changed Date: 2017-10-30 12:42:05 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ontoProc
Version: 1.0.0
Command: rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ontoProc.buildbin-libdir --merge-multiarch ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.0.0.zip && rm ontoProc_1.0.0.tar.gz ontoProc_1.0.0.zip
StartedAt: 2018-04-11 18:26:59 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:28:06 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 66.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ontoProc.buildbin-libdir --merge-multiarch ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.0.0.zip  && rm ontoProc_1.0.0.tar.gz ontoProc_1.0.0.zip
###
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100 21.3M  100 21.3M    0     0  99.6M      0 --:--:-- --:--:-- --:--:--  101M

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'ontoProc/vignettes/ontoProc.Rmd' to 'ontoProc/README.md'
* installing *source* package 'ontoProc' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ontoProc'
    finding HTML links ... done
    TermSet-class                           html  
    allGOterms                              html  
    c-TermSet-method                        html  
    cellTypeToGO                            html  
    demoApp                                 html  
    fastGrep                                html  
    getCellOnto                             html  
    makeSelectInput                         html  
    secLevGen                               html  
    siblings_TAG                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'ontoProc/vignettes/ontoProc.Rmd' to 'ontoProc/README.md'
* installing *source* package 'ontoProc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ontoProc' as ontoProc_1.0.0.zip
* DONE (ontoProc)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'ontoProc' successfully unpacked and MD5 sums checked
In R CMD INSTALL