Back to Multiple platform build/check report for BioC 3.6
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD BIN report for minfi on tokay1

This page was generated on 2018-04-12 13:21:18 -0400 (Thu, 12 Apr 2018).

Package 859/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
minfi 1.24.0
Kasper Daniel Hansen
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/minfi
Branch: RELEASE_3_6
Last Commit: a4df428
Last Changed Date: 2017-10-30 12:39:36 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: minfi
Version: 1.24.0
Command: cd minfi.buildbin-libdir/minfi && zip -r ../../minfi_1.24.0.zip . & cd ../..
StartedAt: 2018-04-12 04:51:39 -0400 (Thu, 12 Apr 2018)
EndedAt: 2018-04-12 04:52:12 -0400 (Thu, 12 Apr 2018)
EllapsedTime: 33.3 seconds
RetCode: 0
Status:  OK  
PackageFile: minfi_1.24.0.zip
PackageFileSize: 1.653 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd minfi.buildbin-libdir/minfi && zip -r ../../minfi_1.24.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (332 bytes security) (deflated 74%)
  adding: DESCRIPTION (332 bytes security) (deflated 55%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/index.html (332 bytes security) (deflated 57%)
  adding: doc/minfi.pdf (332 bytes security) (deflated 13%)
  adding: doc/minfi.R (332 bytes security) (deflated 72%)
  adding: doc/minfi.Rmd (332 bytes security) (deflated 63%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 84%)
  adding: help/minfi.rdb (332 bytes security) (deflated 1%)
  adding: help/minfi.rdx (332 bytes security) (stored 0%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 88%)
  adding: html/blockFinder.html (332 bytes security) (deflated 63%)
  adding: html/bumphunter.html (332 bytes security) (deflated 64%)
  adding: html/combineArrays.html (332 bytes security) (deflated 69%)
  adding: html/compartments.html (332 bytes security) (deflated 57%)
  adding: html/controlStripPlot.html (332 bytes security) (deflated 57%)
  adding: html/convertArray.html (332 bytes security) (deflated 69%)
  adding: html/cpgCollapse.html (332 bytes security) (deflated 64%)
  adding: html/densityBeanPlot.html (332 bytes security) (deflated 58%)
  adding: html/densityPlot.html (332 bytes security) (deflated 61%)
  adding: html/detectionP.html (332 bytes security) (deflated 51%)
  adding: html/dmpFinder.html (332 bytes security) (deflated 54%)
  adding: html/estimateCellCounts.html (332 bytes security) (deflated 62%)
  adding: html/fixMethOutliers.html (332 bytes security) (deflated 54%)
  adding: html/gaphunter.html (332 bytes security) (deflated 57%)
  adding: html/GenomicMethylSet-class.html (332 bytes security) (deflated 69%)
  adding: html/GenomicRatioSet-class.html (332 bytes security) (deflated 67%)
  adding: html/getAnnotation.html (332 bytes security) (deflated 65%)
  adding: html/getGenomicRatioSetFromGEO.html (332 bytes security) (deflated 60%)
  adding: html/getQC.html (332 bytes security) (deflated 54%)
  adding: html/getSex.html (332 bytes security) (deflated 56%)
  adding: html/IlluminaMethylationAnnotation-class.html (332 bytes security) (deflated 61%)
  adding: html/IlluminaMethylationManifest-class.html (332 bytes security) (deflated 69%)
  adding: html/logit2.html (332 bytes security) (deflated 47%)
  adding: html/makeGenomicRatioSetFromMatrix.html (332 bytes security) (deflated 60%)
  adding: html/mapToGenome-methods.html (332 bytes security) (deflated 59%)
  adding: html/mdsPlot.html (332 bytes security) (deflated 63%)
  adding: html/MethylSet-class.html (332 bytes security) (deflated 67%)
  adding: html/minfi-defunct.html (332 bytes security) (deflated 54%)
  adding: html/minfi-deprecated.html (332 bytes security) (deflated 54%)
  adding: html/minfi-package.html (332 bytes security) (deflated 44%)
  adding: html/minfiQC.html (332 bytes security) (deflated 58%)
  adding: html/plotBetasByType.html (332 bytes security) (deflated 61%)
  adding: html/plotCpg.html (332 bytes security) (deflated 60%)
  adding: html/preprocessFunnorm.html (332 bytes security) (deflated 60%)
  adding: html/preprocessIllumina.html (332 bytes security) (deflated 58%)
  adding: html/preprocessNoob.html (332 bytes security) (deflated 58%)
  adding: html/preprocessQuantile.html (332 bytes security) (deflated 61%)
  adding: html/preprocessRaw.html (332 bytes security) (deflated 54%)
  adding: html/preprocessSwan.html (332 bytes security) (deflated 58%)
  adding: html/qcReport.html (332 bytes security) (deflated 57%)
  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: html/ratioConvert-methods.html (332 bytes security) (deflated 59%)
  adding: html/RatioSet-class.html (332 bytes security) (deflated 66%)
  adding: html/read.metharray.exp.html (332 bytes security) (deflated 62%)
  adding: html/read.metharray.html (332 bytes security) (deflated 58%)
  adding: html/read.metharray.sheet.html (332 bytes security) (deflated 59%)
  adding: html/readGEORawFile.html (332 bytes security) (deflated 61%)
  adding: html/readTCGA.html (332 bytes security) (deflated 62%)
  adding: html/RGChannelSet-class.html (332 bytes security) (deflated 66%)
  adding: html/subsetByLoci.html (332 bytes security) (deflated 58%)
  adding: html/utils.html (332 bytes security) (deflated 51%)
  adding: INDEX (332 bytes security) (deflated 69%)
  adding: MD5 (332 bytes security) (deflated 52%)
  adding: Meta/ (372 bytes security) (stored 0%)
  adding: Meta/features.rds (332 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
  adding: Meta/links.rds (332 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
  adding: Meta/package.rds (332 bytes security) (stored 0%)
  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 63%)
  adding: NEWS.Rd (332 bytes security) (deflated 63%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/minfi (332 bytes security) (deflated 41%)
  adding: R/minfi.rdb (332 bytes security) (deflated 20%)
  adding: R/minfi.rdx (332 bytes security) (deflated 0%)
  adding: scripts/ (372 bytes security) (stored 0%)
  adding: scripts/GenomeStudio.R (332 bytes security) (deflated 74%)
  adding: testData/ (372 bytes security) (stored 0%)
  adding: testData/testData_compartments.R (332 bytes security) (deflated 45%)
  adding: testData/testData_compartments.Rout (332 bytes security) (deflated 61%)
  adding: testData/testData_preprocessFunnorm.R (332 bytes security) (deflated 53%)
  adding: testData/testData_preprocessFunnorm.Rout (332 bytes security) (deflated 61%)
  adding: testData/testData_preprocessIllumina.R (332 bytes security) (deflated 55%)
  adding: testData/testData_preprocessIllumina.Rout (332 bytes security) (deflated 61%)
  adding: testData/testData_preprocessNoob.R (332 bytes security) (deflated 51%)
  adding: testData/testData_preprocessNoob.Rout (332 bytes security) (deflated 61%)
  adding: testData/testData_preprocessQuantile.R (332 bytes security) (deflated 54%)
  adding: testData/testData_preprocessQuantile.Rout (332 bytes security) (deflated 62%)
  adding: testData/testData_preprocessRaw.R (332 bytes security) (deflated 50%)
  adding: testData/testData_preprocessRaw.Rout (332 bytes security) (deflated 61%)
  adding: testData/testData_preprocessSWAN.R (332 bytes security) (deflated 49%)
  adding: testData/testData_preprocessSWAN.Rout (332 bytes security) (deflated 61%)
  adding: unitTests/ (372 bytes security) (stored 0%)
  adding: unitTests/digest_compartments.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessFunnorm.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessIllumina.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessNoob.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessQuantile.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessRaw.rda (332 bytes security) (stored 0%)
  adding: unitTests/digest_preprocessSWAN.rda (332 bytes security) (stored 0%)
  adding: unitTests/test_base.R (332 bytes security) (stored 0%)
  adding: unitTests/test_compartments.R (332 bytes security) (deflated 49%)
  adding: unitTests/test_preprocess.R (332 bytes security) (deflated 83%)
  adding: unitTests/test_qc.R (332 bytes security) (deflated 29%)