Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:12:31 -0400 (Thu, 12 Apr 2018).
Package 818/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
metabomxtr 1.12.0 Michael Nodzenski
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | [ OK ] | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | OK | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK |
Package: metabomxtr |
Version: 1.12.0 |
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings metabomxtr_1.12.0.tar.gz |
StartedAt: 2018-04-12 00:53:45 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 00:54:51 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 66.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: metabomxtr.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings metabomxtr_1.12.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.6-bioc/meat/metabomxtr.Rcheck’ * using R version 3.4.4 (2018-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘metabomxtr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘metabomxtr’ version ‘1.12.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘metabomxtr’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
metabomxtr.Rcheck/00install.out
* installing *source* package ‘metabomxtr’ ... ** R ** data ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (metabomxtr)
metabomxtr.Rcheck/metabomxtr-Ex.timings
name | user | system | elapsed | |
addBatchMeans | 0.044 | 0.000 | 0.041 | |
addOutlierInfo | 0.000 | 0.000 | 0.002 | |
allMissingLevels | 0.000 | 0.004 | 0.004 | |
anyMissingLevels | 0.000 | 0.000 | 0.003 | |
idMissingLevels | 0.012 | 0.000 | 0.014 | |
metabomxtr-package | 0.788 | 0.152 | 2.101 | |
metabplot | 2.416 | 0.024 | 2.894 | |
mixnorm | 0.080 | 0.032 | 0.643 | |
mxtrmod | 0.176 | 0.056 | 1.966 | |
mxtrmodLL | 0.004 | 0.004 | 0.009 | |
mxtrmodLRT | 0.064 | 0.036 | 1.017 | |
mxtrmodstart | 0.000 | 0.000 | 0.004 | |
removeAllMissingCatVar | 0.048 | 0.000 | 0.047 | |
removeMissingLevels | 0.004 | 0.000 | 0.003 | |
runMxtrmod | 1.740 | 0.012 | 1.752 | |