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INSTALL report for flowStats on tokay1

This page was generated on 2018-04-12 13:19:41 -0400 (Thu, 12 Apr 2018).

Package 493/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowStats 3.36.0
Greg Finak and Mike Jiang
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/flowStats
Branch: RELEASE_3_6
Last Commit: 427d524
Last Changed Date: 2017-10-30 12:39:26 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: flowStats
Version: 3.36.0
Command: rm -rf flowStats.buildbin-libdir && mkdir flowStats.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/flowStats_3.36.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=flowStats.buildbin-libdir --merge-multiarch flowStats_3.36.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL flowStats_3.36.0.zip && rm flowStats_3.36.0.tar.gz flowStats_3.36.0.zip
StartedAt: 2018-04-11 18:47:21 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:48:09 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 48.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf flowStats.buildbin-libdir && mkdir flowStats.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/flowStats_3.36.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=flowStats.buildbin-libdir --merge-multiarch flowStats_3.36.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL flowStats_3.36.0.zip  && rm flowStats_3.36.0.tar.gz flowStats_3.36.0.zip
###
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100 1500k  100 1500k    0     0  10.6M      0 --:--:-- --:--:-- --:--:-- 10.9M

install for i386

* installing *source* package 'flowStats' ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'flowStats'
    finding HTML links ... done
    BackGating                              html  
    ITN                                     html  
    autoGate                                html  
    binByRef                                html  
    calcPBChiSquare                         html  
    calcPearsonChi                          html  
    curv1Filter-class                       html  
    finding level-2 HTML links ... done

    curv2Filter-class                       html  
    curvPeaks                               html  
    density1d                               html  
    flowStats-package                       html  
    gaussNorm                               html  
    gpaSet                                  html  
    iProcrustes                             html  
    idFeaturesByBackgating                  html  
    landmarkMatrix                          html  
    lymphGate                               html  
    normQA                                  html  
    normalize                               html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpewRqOg/R.INSTALLf4430c6c76/flowStats/man/normalize.Rd:58: missing file link 'ncdfFlowSet'
    plotBins                                html  
    proBin                                  html  
    quadrantGate                            html  
    rangeGate                               html  
    singletGate                             html  
    warpSet                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'flowStats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowStats' as flowStats_3.36.0.zip
* DONE (flowStats)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'flowStats' successfully unpacked and MD5 sums checked
In R CMD INSTALL