Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:18:52 -0400 (Thu, 12 Apr 2018).
Package 124/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
biocGraph 1.40.0 Florian Hahne
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ OK ] | OK | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: biocGraph |
Version: 1.40.0 |
Command: rm -rf biocGraph.buildbin-libdir biocGraph.Rcheck && mkdir biocGraph.buildbin-libdir biocGraph.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=biocGraph.buildbin-libdir biocGraph_1.40.0.tar.gz >biocGraph.Rcheck\00install.out 2>&1 && cp biocGraph.Rcheck\00install.out biocGraph-install.out && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=biocGraph.buildbin-libdir --install="check:biocGraph-install.out" --force-multiarch --no-vignettes --timings biocGraph_1.40.0.tar.gz |
StartedAt: 2018-04-11 22:29:01 -0400 (Wed, 11 Apr 2018) |
EndedAt: 2018-04-11 22:30:49 -0400 (Wed, 11 Apr 2018) |
EllapsedTime: 108.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: biocGraph.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf biocGraph.buildbin-libdir biocGraph.Rcheck && mkdir biocGraph.buildbin-libdir biocGraph.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=biocGraph.buildbin-libdir biocGraph_1.40.0.tar.gz >biocGraph.Rcheck\00install.out 2>&1 && cp biocGraph.Rcheck\00install.out biocGraph-install.out && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=biocGraph.buildbin-libdir --install="check:biocGraph-install.out" --force-multiarch --no-vignettes --timings biocGraph_1.40.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.6-bioc/meat/biocGraph.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'biocGraph/DESCRIPTION' ... OK * this is package 'biocGraph' version '1.40.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'biocGraph' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE Packages listed in more than one of Depends, Imports, Suggests, Enhances: 'Rgraphviz' 'graph' 'geneplotter' A package should be listed in only one of these fields. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE imageMap,Ragraph-connection-list-character: no visible global function definition for 'par' imageMap,Ragraph-connection-list-character: no visible global function definition for 'AgNode' imageMap,Ragraph-connection-list-character: no visible global function definition for 'getNodeXY' imageMap,Ragraph-connection-list-character: no visible global function definition for 'getNodeHeight' imageMap,Ragraph-connection-list-character: no visible global function definition for 'getNodeLW' imageMap,Ragraph-connection-list-character: no visible global function definition for 'getNodeRW' imageMap,graph-connection-list-character: no visible global function definition for 'nodes' imageMap,graph-connection-list-character: no visible global function definition for 'graphRenderInfo' Undefined global functions or variables: AgNode getNodeHeight getNodeLW getNodeRW getNodeXY graphRenderInfo nodes par Consider adding importFrom("graphics", "par") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See 'C:/Users/biocbuild/bbs-3.6-bioc/meat/biocGraph.Rcheck/00check.log' for details.
biocGraph.Rcheck/00install.out
install for i386 * installing *source* package 'biocGraph' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices converting help for package 'biocGraph' finding HTML links ... done imageMap html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'biocGraph' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'biocGraph' as biocGraph_1.40.0.zip * DONE (biocGraph) In R CMD INSTALL In R CMD INSTALL
biocGraph.Rcheck/examples_i386/biocGraph-Ex.timings
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biocGraph.Rcheck/examples_x64/biocGraph-Ex.timings
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