Nicolas Servant
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/HiTC |
| Branch: RELEASE_3_6 |
| Last Commit: 44938da |
| Last Changed Date: 2018-04-02 13:42:01 -0400 (Mon, 02 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:21:44 -0400 (Thu, 12 Apr 2018).
| Package 657/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| HiTC 1.22.1 Nicolas Servant
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: HiTC |
| Version: 1.22.1 |
| Command: rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/HiTC_1.22.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=HiTC.buildbin-libdir --merge-multiarch HiTC_1.22.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL HiTC_1.22.1.zip && rm HiTC_1.22.1.tar.gz HiTC_1.22.1.zip |
| StartedAt: 2018-04-11 18:47:25 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:48:33 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 68.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/HiTC_1.22.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=HiTC.buildbin-libdir --merge-multiarch HiTC_1.22.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL HiTC_1.22.1.zip && rm HiTC_1.22.1.tar.gz HiTC_1.22.1.zip
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install for i386
* installing *source* package 'HiTC' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'HiTC'
finding HTML links ... done
CQC html
HTCexp-class html
HTClist-class html
HiTC-internal html
Nora_5C html
binningC html
directionalityIndex html
discretize html
export.my5C html
exportC html
extractRegion html
getAnnotatedRestrictionSites html
getExpectedCounts html
getPearsonMap html
getRestrictionFragmentsPerChromosome html
import.my5C html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpqmxYwD/R.INSTALL94499a71fa/HiTC/man/import.my5C.Rd:36: missing file link 'import'
importC html
intervalsDist html
mapC html
normICE html
normLGF html
pca.hic html
removeIntervals html
setGenomicFeatures html
setIntervalScale html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'HiTC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HiTC' as HiTC_1.22.1.zip
* DONE (HiTC)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'HiTC' successfully unpacked and MD5 sums checked
In R CMD INSTALL