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BUILD report for BSgenome on tokay1

This page was generated on 2018-04-12 13:18:17 -0400 (Thu, 12 Apr 2018).

Package 162/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BSgenome 1.46.0
H. Pagès
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/BSgenome
Branch: RELEASE_3_6
Last Commit: bdfbd6d
Last Changed Date: 2017-10-30 12:39:17 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK [ OK ] WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: BSgenome
Version: 1.46.0
Command: chmod a+r BSgenome -R && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data BSgenome
StartedAt: 2018-04-11 19:10:41 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 19:14:13 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 212.2 seconds
RetCode: 0
Status:  OK  
PackageFile: BSgenome_1.46.0.tar.gz
PackageFileSize: 5.785 MiB

Command output

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### Running command:
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###   chmod a+r BSgenome -R && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data BSgenome
###
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* checking for file 'BSgenome/DESCRIPTION' ... OK
* preparing 'BSgenome':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory 'BSgenome/inst/pkgtemplates/BSgenome_datapkg/inst/extdata' is empty
WARNING: directory 'BSgenome/inst/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata' is empty
* building 'BSgenome_1.46.0.tar.gz'
Warning in utils::tar(filepath, pkgname, compression = "gzip", compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  'BSgenome/inst/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh'