Vladimir Kiselev
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/scmap |
| Branch: RELEASE_3_6 |
| Last Commit: fd54f6b |
| Last Changed Date: 2017-12-11 08:47:32 -0400 (Mon, 11 Dec 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:45:13 -0400 (Thu, 12 Apr 2018).
| Package 1258/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| scmap 1.1.5 Vladimir Kiselev
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | [ OK ] | |
| Package: scmap |
| Version: 1.1.5 |
| Command: rm -rf scmap.buildbin-libdir && mkdir scmap.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh scmap_1.1.5.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R scmap.buildbin-libdir |
| StartedAt: 2018-04-12 12:13:25 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 12:14:02 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 37.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: scmap_1.1.5.tgz |
| PackageFileSize: 3.45 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf scmap.buildbin-libdir && mkdir scmap.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh scmap_1.1.5.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R scmap.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=scmap.buildbin-libdir scmap_1.1.5.tar.gz' >>>>>>> * installing *source* package ‘scmap’ ... ** libs clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.4/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.4/Resources/library/RcppArmadillo/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.4/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.4/Resources/library/RcppArmadillo/include" -I/usr/local/include -fPIC -Wall -g -O2 -c scmap.cpp -o scmap.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scmap.so RcppExports.o scmap.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.6-bioc/meat/scmap.buildbin-libdir/scmap/libs ** R ** data *** moving datasets to lazyload DB ** inst ** preparing package for lazy loading Creating a generic function for ‘toJSON’ from package ‘jsonlite’ in package ‘googleVis’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded Creating a generic function for ‘toJSON’ from package ‘jsonlite’ in package ‘googleVis’ * DONE (scmap) >>>>>>> >>>>>>> FIXING LINKS FOR scmap.buildbin-libdir/scmap/libs//scmap.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/gfortran/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so" install_name_tool -change "/usr/local/gfortran/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "scmap.buildbin-libdir/scmap/libs//scmap.so"