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INSTALL report for omicade4 on tokay1

This page was generated on 2018-04-12 13:23:20 -0400 (Thu, 12 Apr 2018).

Package 964/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
omicade4 1.18.0
Chen Meng
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/omicade4
Branch: RELEASE_3_6
Last Commit: a94f3a1
Last Changed Date: 2017-10-30 12:40:07 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: omicade4
Version: 1.18.0
Command: rm -rf omicade4.buildbin-libdir && mkdir omicade4.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/omicade4_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=omicade4.buildbin-libdir --merge-multiarch omicade4_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL omicade4_1.18.0.zip && rm omicade4_1.18.0.tar.gz omicade4_1.18.0.zip
StartedAt: 2018-04-11 18:27:00 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:27:30 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 29.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf omicade4.buildbin-libdir && mkdir omicade4.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/omicade4_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=omicade4.buildbin-libdir --merge-multiarch omicade4_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL omicade4_1.18.0.zip  && rm omicade4_1.18.0.tar.gz omicade4_1.18.0.zip
###
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install for i386

* installing *source* package 'omicade4' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'omicade4'
    finding HTML links ... done
    NCI60_4arrays                           html  
    mcia                                    html  
    omicade4-package                        html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpqcBgkv/R.INSTALL8c840805e5e/omicade4/man/omicade4-package.Rd:48: missing file link 'ade4'
    plotVar                                 html  
    plotVar.cia                             html  
    plotVar.mcia                            html  
    selectVar                               html  
    selectVar.cia                           html  
    selectVar.mcia                          html  
    topVar                                  html  
    topVar.cia                              html  
    topVar.mcia                             html  
** building package indices
** installing vignettes
   'omicade4.Rnw' 
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'omicade4' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'omicade4' as omicade4_1.18.0.zip
* DONE (omicade4)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'omicade4' successfully unpacked and MD5 sums checked
In R CMD INSTALL