Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:06:53 -0400 (Thu, 12 Apr 2018).
Package 16/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
affy 1.56.0 Rafael A. Irizarry
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | WARNINGS | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
Package: affy |
Version: 1.56.0 |
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL affy |
StartedAt: 2018-04-11 18:01:12 -0400 (Wed, 11 Apr 2018) |
EndedAt: 2018-04-11 18:01:17 -0400 (Wed, 11 Apr 2018) |
EllapsedTime: 5.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL affy ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.6-bioc/R/library’ * installing *source* package ‘affy’ ... creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for main in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes updating cache ./config.cache creating ./config.status creating src/Makevars ** libs gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I"/home/biocbuild/bbs-3.6-bioc/R/library/preprocessCore/include" -I/usr/local/include -fpic -g -O2 -Wall -c chipbackground.c -o chipbackground.o gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I"/home/biocbuild/bbs-3.6-bioc/R/library/preprocessCore/include" -I/usr/local/include -fpic -g -O2 -Wall -c getall_locations.c -o getall_locations.o gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I"/home/biocbuild/bbs-3.6-bioc/R/library/preprocessCore/include" -I/usr/local/include -fpic -g -O2 -Wall -c mas5calls.c -o mas5calls.o gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I"/home/biocbuild/bbs-3.6-bioc/R/library/preprocessCore/include" -I/usr/local/include -fpic -g -O2 -Wall -c rma2.c -o rma2.o gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I"/home/biocbuild/bbs-3.6-bioc/R/library/preprocessCore/include" -I/usr/local/include -fpic -g -O2 -Wall -c rma_common.c -o rma_common.o g++ -shared -L/home/biocbuild/bbs-3.6-bioc/R/lib -L/usr/local/lib -o affy.so chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lz -L/home/biocbuild/bbs-3.6-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.6-bioc/R/library/affy/libs ** R ** data ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (affy)