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BUILD report for MSnbase on veracruz1

This page was generated on 2018-04-12 13:34:10 -0400 (Thu, 12 Apr 2018).

Package 903/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSnbase 2.4.2
Laurent Gatto
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/MSnbase
Branch: RELEASE_3_6
Last Commit: c045d65
Last Changed Date: 2018-01-23 04:39:37 -0400 (Tue, 23 Jan 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: MSnbase
Version: 2.4.2
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSnbase
StartedAt: 2018-04-11 19:34:51 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 19:35:59 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 68.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSnbase
###
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* checking for file ‘MSnbase/DESCRIPTION’ ... OK
* preparing ‘MSnbase’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
sh: line 1: 34572 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/mapheat-1.png' -trim 'MSnbase-demo_files/figure-html/mapheat-1.png' > /dev/null
sh: line 1: 34622 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/map3d-1.png' -trim 'MSnbase-demo_files/figure-html/map3d-1.png' > /dev/null
sh: line 1: 34698 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/map3d2-1.png' -trim 'MSnbase-demo_files/figure-html/map3d2-1.png' > /dev/null
sh: line 1: 35042 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/spectrumPlot-1.png' -trim 'MSnbase-demo_files/figure-html/spectrumPlot-1.png' > /dev/null
sh: line 1: 35592 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/msnexpPlot-1.png' -trim 'MSnbase-demo_files/figure-html/msnexpPlot-1.png' > /dev/null
sh: line 1: 35629 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/chromPlot-1.png' -trim 'MSnbase-demo_files/figure-html/chromPlot-1.png' > /dev/null
sh: line 1: 35682 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/idvis-1.png' -trim 'MSnbase-demo_files/figure-html/idvis-1.png' > /dev/null
sh: line 1: 36095 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/fragplot-1.png' -trim 'MSnbase-demo_files/figure-html/fragplot-1.png' > /dev/null
sh: line 1: 36124 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/spectrum-clean-plot-1.png' -trim 'MSnbase-demo_files/figure-html/spectrum-clean-plot-1.png' > /dev/null
sh: line 1: 36126 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/preprocPlot-1.png' -trim 'MSnbase-demo_files/figure-html/preprocPlot-1.png' > /dev/null
sh: line 1: 36131 Abort trap: 6           'convert' 'MSnbase-demo_files/figure-html/quantitationPlot-1.png' -trim 'MSnbase-demo_files/figure-html/quantitationPlot-1.png' > /dev/null
Quitting from lines 1001-1008 (MSnbase-demo.Rmd) 
Error: processing vignette 'MSnbase-demo.Rmd' failed with diagnostics:
there is no package called 'Rdisop'
Execution halted