Solaiappan Manimaran
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/BatchQC |
| Branch: RELEASE_3_6 |
| Last Commit: 8a0b9cb |
| Last Changed Date: 2017-12-11 00:08:57 -0400 (Mon, 11 Dec 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:27:56 -0400 (Thu, 12 Apr 2018).
| Package 95/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BatchQC 1.6.1 Solaiappan Manimaran
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: BatchQC |
| Version: 1.6.1 |
| Command: rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/BatchQC_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=BatchQC.buildbin-libdir --merge-multiarch BatchQC_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL BatchQC_1.6.1.zip && rm BatchQC_1.6.1.tar.gz BatchQC_1.6.1.zip |
| StartedAt: 2018-04-11 18:35:19 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:37:12 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 113.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/BatchQC_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=BatchQC.buildbin-libdir --merge-multiarch BatchQC_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL BatchQC_1.6.1.zip && rm BatchQC_1.6.1.tar.gz BatchQC_1.6.1.zip
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install for i386
* installing *source* package 'BatchQC' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'BatchQC'
finding HTML links ... done
BatchQCout-class html
batchQC html
batchQC_analyze html
batchQC_condition_adjusted html
batchQC_filter_genes html
batchQC_fsva_adjusted html
batchQC_num.sv html
batchQC_shapeVariation html
batchQC_sva html
batchQC_svregress_adjusted html
batchqc_circosplot html
batchqc_correlation html
batchqc_corscatter html
batchqc_explained_variation html
batchqc_heatmap html
batchqc_pc_explained_variation html
batchqc_pca html
batchqc_pca_svd html
batchtest html
combatPlot html
example_batchqc_data html
getShinyInput html
getShinyInputCombat html
getShinyInputOrig html
getShinyInputSVA html
getShinyInputSVAf html
getShinyInputSVAr html
gnormalize html
lmFitC html
log2CPM html
makeSVD html
pcRes html
plotPC html
plot_genewise_moments html
plot_samplewise_moments html
protein_example_data html
rnaseq_sim html
setShinyInput html
setShinyInputCombat html
setShinyInputOrig html
setShinyInputSVA html
setShinyInputSVAf html
setShinyInputSVAr html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'BatchQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BatchQC' as BatchQC_1.6.1.zip
* DONE (BatchQC)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'BatchQC' successfully unpacked and MD5 sums checked
In R CMD INSTALL