diffHic 1.8.1
Aaron Lun
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/diffHic | | Last Changed Rev: 129582 / Revision: 131943 | | Last Changed Date: 2017-05-14 11:36:56 -0400 (Sun, 14 May 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd diffHic.buildbin-libdir/diffHic && zip -r ../../diffHic_1.8.1.zip . & cd ../..
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adding: CITATION (264 bytes security) (deflated 41%)
adding: DESCRIPTION (264 bytes security) (deflated 42%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/bam2hdf.R (264 bytes security) (deflated 65%)
adding: doc/diffHic.pdf (264 bytes security) (deflated 6%)
adding: doc/diffHic.Rnw (264 bytes security) (deflated 50%)
adding: doc/diffHicUsersGuide.pdf (264 bytes security) (deflated 8%)
adding: doc/index.html (264 bytes security) (deflated 63%)
adding: doc/sra2bam.sh (264 bytes security) (deflated 58%)
adding: exdata/ (304 bytes security) (stored 0%)
adding: exdata/cuts.rds (264 bytes security) (stored 0%)
adding: exdata/generator.R (264 bytes security) (deflated 80%)
adding: exdata/hic_sort.bam (264 bytes security) (stored 0%)
adding: help/ (304 bytes security) (stored 0%)
adding: help/aliases.rds (264 bytes security) (stored 0%)
adding: help/AnIndex (264 bytes security) (deflated 64%)
adding: help/diffHic.rdb (264 bytes security) (deflated 0%)
adding: help/diffHic.rdx (264 bytes security) (stored 0%)
adding: help/paths.rds (264 bytes security) (stored 0%)
adding: html/ (304 bytes security) (stored 0%)
adding: html/00Index.html (264 bytes security) (deflated 78%)
adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 64%)
adding: libs/ (304 bytes security) (stored 0%)
adding: libs/i386/ (304 bytes security) (stored 0%)
adding: libs/i386/diffHic.dll (264 bytes security) (deflated 60%)
adding: libs/x64/ (304 bytes security) (stored 0%)
adding: libs/x64/diffHic.dll (264 bytes security) (deflated 65%)
adding: MD5 (264 bytes security) (deflated 49%)
adding: Meta/ (304 bytes security) (stored 0%)
adding: Meta/features.rds (264 bytes security) (stored 0%)
adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
adding: Meta/links.rds (264 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
adding: Meta/package.rds (264 bytes security) (stored 0%)
adding: Meta/Rd.rds (264 bytes security) (stored 0%)
adding: Meta/vignette.rds (264 bytes security) (stored 0%)
adding: NAMESPACE (264 bytes security) (deflated 46%)
adding: NEWS.Rd (264 bytes security) (deflated 60%)
adding: python/ (304 bytes security) (stored 0%)
adding: python/iter_map.py (264 bytes security) (deflated 62%)
adding: python/presplit_map.py (264 bytes security) (deflated 63%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/diffHic (264 bytes security) (deflated 41%)
adding: R/diffHic.rdb (264 bytes security) (deflated 19%)
adding: R/diffHic.rdx (264 bytes security) (stored 0%)
adding: tests/ (304 bytes security) (stored 0%)
adding: tests/run_all_tests.sh (264 bytes security) (deflated 25%)
adding: tests/simcounts.R (264 bytes security) (deflated 63%)
adding: tests/simsam.R (264 bytes security) (deflated 59%)
adding: tests/test-anno.R (264 bytes security) (deflated 74%)
adding: tests/test-anno.Rout.save (264 bytes security) (deflated 74%)
adding: tests/test-box.R (264 bytes security) (deflated 67%)
adding: tests/test-box.Rout.save (264 bytes security) (deflated 62%)
adding: tests/test-cluster.R (264 bytes security) (deflated 78%)
adding: tests/test-cluster.Rout.save (264 bytes security) (deflated 79%)
adding: tests/test-connect.R (264 bytes security) (deflated 78%)
adding: tests/test-connect.Rout.save (264 bytes security) (deflated 80%)
adding: tests/test-cut.R (264 bytes security) (deflated 60%)
adding: tests/test-cut.Rout.save (264 bytes security) (deflated 69%)
adding: tests/test-diclust.R (264 bytes security) (deflated 71%)
adding: tests/test-diclust.Rout.save (264 bytes security) (deflated 68%)
adding: tests/test-dnase.R (264 bytes security) (deflated 78%)
adding: tests/test-dnase.Rout.save (264 bytes security) (deflated 79%)
adding: tests/test-domains.R (264 bytes security) (deflated 77%)
adding: tests/test-domains.Rout.save (264 bytes security) (deflated 75%)
adding: tests/test-empty.R (264 bytes security) (deflated 51%)
adding: tests/test-empty.Rout.save (264 bytes security) (deflated 59%)
adding: tests/test-filter.R (264 bytes security) (deflated 74%)
adding: tests/test-filter.Rout.save (264 bytes security) (deflated 70%)
adding: tests/test-hic-pair.R (264 bytes security) (deflated 73%)
adding: tests/test-hic-pair.Rout.save (264 bytes security) (deflated 79%)
adding: tests/test-interactions.R (264 bytes security) (deflated 79%)
adding: tests/test-interactions.Rout.save (264 bytes security) (deflated 78%)
adding: tests/test-itercor.R (264 bytes security) (deflated 65%)
adding: tests/test-itercor.Rout.save (264 bytes security) (deflated 59%)
adding: tests/test-margin.R (264 bytes security) (deflated 77%)
adding: tests/test-margin.Rout.save (264 bytes security) (deflated 74%)
adding: tests/test-neighbor.R (264 bytes security) (deflated 72%)
adding: tests/test-neighbor.Rout.save (264 bytes security) (deflated 75%)
adding: tests/test-pair-manip.R (264 bytes security) (deflated 67%)
adding: tests/test-pair-manip.Rout.save (264 bytes security) (deflated 72%)
adding: tests/test-prune.R (264 bytes security) (deflated 73%)
adding: tests/test-prune.Rout.save (264 bytes security) (deflated 74%)