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BioC 3.4: BUILD report for neaGUI on moscato1

This page was generated on 2016-05-02 10:53:11 -0700 (Mon, 02 May 2016).

Package 776/1213HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
neaGUI 1.9.1
Setia Pramana
Snapshot Date: 2016-05-01 16:20:05 -0700 (Sun, 01 May 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/neaGUI
Last Changed Rev: 116033 / Revision: 116959
Last Changed Date: 2016-04-08 15:55:20 -0700 (Fri, 08 Apr 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  ERROR  skipped 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK [ ERROR ] skipped  skipped 

Summary

Package: neaGUI
Version: 1.9.1
Command: chmod a+r neaGUI -R && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data neaGUI
StartedAt: 2016-05-01 19:20:10 -0700 (Sun, 01 May 2016)
EndedAt: 2016-05-01 19:20:39 -0700 (Sun, 01 May 2016)
EllapsedTime: 28.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r neaGUI -R && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data neaGUI
###
##############################################################################
##############################################################################


* checking for file 'neaGUI/DESCRIPTION' ... OK
* preparing 'neaGUI':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"D:/biocbld/bbs-3.4-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
 ERROR
Loading required package: tcltk
Warning: Package 'neaGUI' is deprecated and will be removed from Bioconductor
  version 3.3
Loading required package: KEGG.db
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'KEGG.db'
Loading required package: org.Hs.eg.db
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'org.Hs.eg.db'

Error: processing vignette 'neaGUI_vignette.Rnw' failed with diagnostics:
 chunk 1 
Error in AnnotationDbi::as.list(KEGGPATHID2EXTID) : 
  object 'KEGGPATHID2EXTID' not found
Execution halted